RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 A0A1B0GW64 132 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 HLA-GP17693 338 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 VAMP1P23763 118 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 C11orf87Q6NUJ2 197 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 LFNGQ8NES3 379 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
UBE3D-204ENST00000430071 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 MCRIP2Q9BUT9 160 aaKnown RBP13.1□□□□□ -0.31
UBE3D-204ENST00000430071 NSG2Q9Y328 171 aa13.1□□□□□ -0.31
UBE3D-204ENST00000430071 TRAV6A0A075B6T7 132 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 A0A0G2JRQ6 117 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 E7EUB6 86 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 ACTL6BO94805 426 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 MAS1LP35410 378 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 AKR1C2P52895 323 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
UBE3D-204ENST00000430071 ANKRD55Q3KP44 614 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 TMEM268Q5VZI3 342 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 OR5M8Q8NGP6 311 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 RBPMSQ93062 196 aaKnown RBP13.09□□□□□ -0.31
UBE3D-204ENST00000430071 PRR25Q96S07 402 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
UBE3D-204ENST00000430071 DBX1A6NMT0 343 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 TEX22C9J3V5 150 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 SFT2D2O95562 160 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 OR4E1P0C645 316 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 APELAP0DMC3 54 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 RPL27AP46776 148 aaKnown RBP13.08□□□□□ -0.31
UBE3D-204ENST00000430071 OR2B8PP59922 312 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 AKIRIN2Q53H80 203 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 NRARPQ7Z6K4 114 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 SLC35G3Q8N808 338 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 OR1N2Q8NGR9 330 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 DPF1Q92782 380 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 MS4A10Q96PG2 267 aa13.08□□□□□ -0.31
UBE3D-204ENST00000430071 C9orf170A2RU37 121 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 SEC14L6B5MCN3 397 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 ATG12O94817 140 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 FGF2P09038 288 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 ANXA3P12429 323 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 SLURP1P55000 103 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 DEFA1P59665 94 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 DEFA3P59666 94 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 RUNX1Q01196 453 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 ENKURQ8TC29 256 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 DCUN1D4Q92564 292 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 IL22RA2Q969J5 263 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 GPR61Q9BZJ8 451 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 TMEM14BQ9NUH8 114 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 FOXA2Q9Y261 457 aaPredicted RBP13.07□□□□□ -0.32
UBE3D-204ENST00000430071 A0A0B4J293 547 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 HMX3A6NHT5 357 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 SNAPC5O75971 98 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 HLA-AP01891 365 aaKnown RBP13.07□□□□□ -0.32
UBE3D-204ENST00000430071 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 TMEM267Q0VDI3 215 aaPredicted RBP13.07□□□□□ -0.32
UBE3D-204ENST00000430071 DHRS2Q13268 280 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 Q6ZRM9 215 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 LGI3Q8N145 548 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 RRNAD1Q96FB5 475 aaKnown RBP13.07□□□□□ -0.32
UBE3D-204ENST00000430071 FYTTD1Q96QD9 318 aaKnown RBP13.07□□□□□ -0.32
UBE3D-204ENST00000430071 PHB2Q99623 299 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 SPIN2AQ99865 258 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 SPIN2BQ9BPZ2 258 aa13.07□□□□□ -0.32
UBE3D-204ENST00000430071 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 A0A087WW49 117 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 MECP2P51608 486 aaKnown RBP13.06□□□□□ -0.32
UBE3D-204ENST00000430071 SRPXP78539 464 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 DEFA5Q01523 94 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 C4orf46Q504U0 113 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 OR5T1Q8NG75 326 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 OR52B4Q8NGK2 314 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
UBE3D-204ENST00000430071 DLX4Q92988 240 aaPredicted RBP13.06□□□□□ -0.32
UBE3D-204ENST00000430071 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 COMMD5Q9GZQ3 224 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 PRNDQ9UKY0 176 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
UBE3D-204ENST00000430071 A0A0B4J2A0 478 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 SPNP16150 400 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 FAM219AQ8IW50 185 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 OR1L8Q8NGR8 309 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 OR4A16Q8NH70 328 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms