RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TMEM17Q86X19 198 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 WFDC3Q8IUB2 231 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 SLC38A6Q8IZM9 456 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 TMEM190Q8WZ59 177 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 DAZ1Q9NQZ3 744 aaKnown RBP11.12□□□□□ -0.63
MSH5-208ENST00000429846 TP53TG1Q9Y2A0 90 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 TRAV3A0A0B4J244 114 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 TSPAN4O14817 238 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 S1PR2O95136 353 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 CLEC2LP0C7M8 214 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 APOC4P55056 127 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 HERV-K104P61576 105 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 SPSB3Q6PJ21 355 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 CADM3Q8N126 398 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 BSCL2Q96G97 398 aaPredicted RBP11.11□□□□□ -0.63
MSH5-208ENST00000429846 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
MSH5-208ENST00000429846 HYDINQ4G0P3 5121 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 LOC100506127A0A0U1RQW1 187 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 SERPINE2P07093 398 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 TRAPPC2P0DI81 140 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 TRAPPC2BP0DI82 140 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 OR13C7P0DN81 318 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 GNRHRP30968 328 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 Q6ZWC4 215 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 CROCCP3Q8IVE0 287 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 LSM10Q969L4 123 aaKnown RBP11.1□□□□□ -0.63
MSH5-208ENST00000429846 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 EHFQ9NZC4 300 aa11.1□□□□□ -0.63
MSH5-208ENST00000429846 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 NUPR2A6NF83 97 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 NDUFA4O00483 81 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 UBE2CO00762 179 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 XRCC3O43542 346 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
MSH5-208ENST00000429846 F2RP25116 425 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 BMI1P35226 326 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 TNFRSF9Q07011 255 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 LAMTOR1Q6IAA8 161 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 DHRS11Q6UWP2 260 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 LINC00476Q8WZB0 136 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 MOB3AQ96BX8 217 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 NDUFA4L2Q9NRX3 87 aa11.09□□□□□ -0.63
MSH5-208ENST00000429846 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
MSH5-208ENST00000429846 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 OR2T8A6NH00 312 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 ATP6V1G2O95670 118 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 RLN1P04808 185 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 TAS2R46P59540 309 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 SLC25A24Q6NUK1 477 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 KIR2DL5BQ8NHK3 375 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
MSH5-208ENST00000429846 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
MSH5-208ENST00000429846 MEIS3P1A6NDR6 274 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 CXorf65A6NEN9 183 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 OR4C46A6NHA9 309 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 K7EMT4 169 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 FCER2P06734 321 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 UBE2NLQ5JXB2 153 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 TSPAN14Q8NG11 270 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
MSH5-208ENST00000429846 TMEM56Q96MV1 263 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 TSC22D3Q99576 134 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 ZNF2Q9BSG1 426 aaPredicted RBP11.07□□□□□ -0.64
MSH5-208ENST00000429846 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 PRNDQ9UKY0 176 aa11.07□□□□□ -0.64
MSH5-208ENST00000429846 A0A0J9YWU9 116 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 C15orf62A8K5M9 175 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 SPRY2O43597 315 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 PGLYRP1O75594 196 aaPredicted RBP11.06□□□□□ -0.64
MSH5-208ENST00000429846 SNAPC5O75971 98 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 RPA2P15927 270 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 RFX2P48378 723 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 NEDD8Q15843 81 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 TMEM69Q5SWH9 247 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 LYG2Q86SG7 212 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 SCARB1Q8WTV0 552 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 FCAMRQ8WWV6 532 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 HINT2Q9BX68 163 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 FAM212BQ9NTI7 297 aaPredicted RBP11.06□□□□□ -0.64
MSH5-208ENST00000429846 UBQLN2Q9UHD9 624 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 OR51B2Q9Y5P1 312 aa11.06□□□□□ -0.64
MSH5-208ENST00000429846 K7EIM0 57 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 GPR31O00270 319 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 KRASP01116 189 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 NAT1P18440 290 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms