RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ENY2Q9NPA8 101 aa7.2□□□□□ -1.26
GABPB1-205ENST00000429662 HEYLQ9NQ87 328 aaPredicted RBP7.2□□□□□ -1.26
GABPB1-205ENST00000429662 PROCRQ9UNN8 238 aa7.2□□□□□ -1.26
GABPB1-205ENST00000429662 A0A087X0M5 115 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 TRBV23-1A0A0A0MS06 115 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV2OR16-5A0A0B4J2B6 119 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 A0A1B0GX30 115 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 A8MXE2 369 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 M0R1X1 148 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 OR9G9P0C7N8 305 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 AREGP15514 252 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 SSTR5P35346 364 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 THBS3P49746 956 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 RHOBP62745 196 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 GNB1P62873 340 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 IQCJQ1A5X6 159 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 COX19Q49B96 90 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 CST9LP1Q5W188 147 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 Q6ZR03 302 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 TMEM144Q7Z5S9 345 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 CD177Q8N6Q3 437 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 Q8N7P7 452 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 CNEP1R1Q8N9A8 125 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 NECAP1Q8NC96 275 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 C19orf24Q9BVV8 132 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 SLC25A10Q9UBX3 287 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-205ENST00000429662 FOXA2Q9Y261 457 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-205ENST00000429662 PXMP4Q9Y6I8 212 aa7.19□□□□□ -1.26
GABPB1-205ENST00000429662 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 C9JCJ5 164 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 PRSS46E5RG02 174 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 GZMBP10144 247 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 RPL29P47914 159 aaKnown RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 FABP6P51161 128 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 RAB4BP61018 213 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 RPL15P61313 204 aaKnown RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 HSPE1P61604 102 aaKnown RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 POU2AF1Q16633 256 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 FAM78BQ5VT40 261 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 ZNF600Q6ZNG1 722 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 BHLHA15Q7RTS1 189 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 SSX9Q7RTT3 188 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 CXorf67Q86X51 503 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 OR10G8Q8NGN5 311 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 GATAD1Q8WUU5 269 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 SFRP2Q96HF1 295 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 FKBP11Q9NYL4 201 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 FUT9Q9Y231 359 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 TCF19Q9Y242 345 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 LSM4Q9Y4Z0 139 aaKnown RBP7.18□□□□□ -1.26
GABPB1-205ENST00000429662 TRAPPC1Q9Y5R8 145 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 DOCK10Q96BY6 2186 aa7.18□□□□□ -1.26
GABPB1-205ENST00000429662 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
GABPB1-205ENST00000429662 ATRQ13535 2644 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 FN1P02751 2386 aaKnown RBP7.17□□□□□ -1.26
GABPB1-205ENST00000429662 TRGV10A0A0A0MS01 117 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 TRBV9A0A0B4J1U6 114 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV3-43A0A0B4J1X8 118 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV1-18A0A0C4DH31 117 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 A0A0U1RQK1 487 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 ZNF320A2RRD8 509 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 C15orf61A6NNL5 157 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 NDUFB4O95168 129 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV3-13P01766 116 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV3-43DP0DP04 118 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 NPPCP23582 126 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 NPY1RP25929 384 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IL3RAP26951 378 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 EDDM3BP56851 147 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 LOXL3P58215 753 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 PAFAH1B2P68402 229 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 EDDM3AQ14507 147 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 DEFB109BQ30KR1 87 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 GCNT2Q8N0V5 402 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 GBGT1Q8N5D6 347 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 C9orf106Q8NAJ2 232 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 RFESDQ8TAC1 157 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 DDB2Q92466 427 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 MGST2Q99735 147 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 C2orf88Q9BSF0 95 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 FAM234AQ9H0X4 552 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 OPN3Q9H1Y3 402 aaPredicted RBP7.17□□□□□ -1.26
GABPB1-205ENST00000429662 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 TMEM167BQ9NRX6 74 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 CALYQ9NYX4 217 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 PRNDQ9UKY0 176 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 ZNF257Q9Y2Q1 563 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 ARHGAP21Q5T5U3 1957 aa7.17□□□□□ -1.26
GABPB1-205ENST00000429662 IGKV1D-17A0A075B6S4 117 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms