RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 VSTM5A8MXK1 200 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 GNRHRP30968 328 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 ZNF154Q13106 437 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 VAMP3Q15836 100 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 PSG3Q16557 428 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 SMIM21Q3B7S5 101 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 NIT1Q86X76 327 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 NEIL1Q96FI4 390 aaPredicted RBP9.46□□□□□ -0.89
CECR3-201ENST00000428828 SAMD10Q9BYL1 202 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 PPIAL4AQ9Y536 164 aa9.46□□□□□ -0.89
CECR3-201ENST00000428828 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 IGHV3-64DA0A0J9YX35 117 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 CORTO00230 105 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 SIRPB1O00241 398 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 IGHV3-13P01766 116 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 KITLGP21583 273 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 PRRX1P54821 245 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 AKAP6Q13023 2319 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 KISS1Q15726 138 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 CXorf66Q5JRM2 361 aaPredicted RBP9.46□□□□□ -0.9
CECR3-201ENST00000428828 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 SPIN3Q5JUX0 258 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 PLCXD3Q63HM9 321 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 Q6ZSR3 168 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 ZNF695Q8IW36 515 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 SELENOHQ8IZQ5 122 aaKnown RBP9.46□□□□□ -0.9
CECR3-201ENST00000428828 LHX4Q969G2 390 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 Q96M66 194 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 SMPXQ9UHP9 88 aa9.46□□□□□ -0.9
CECR3-201ENST00000428828 IGKV1-9A0A0C4DH69 117 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 A0A1B0GUS0 222 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 CHST1O43916 411 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 TMEM249Q2WGJ8 235 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 PHLDA2Q53GA4 152 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 Q6ZR03 302 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 BATF2Q8N1L9 274 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 ZCCHC24Q8N2G6 241 aaKnown RBP9.45□□□□□ -0.9
CECR3-201ENST00000428828 OR4F17Q8NGA8 305 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 PIGTQ969N2 578 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 SPACA5Q96QH8 159 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 OR4F4Q96R69 305 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 DYNLRB1Q9NP97 96 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 SLC39A9Q9NUM3 307 aa9.45□□□□□ -0.9
CECR3-201ENST00000428828 SLC33A1O00400 549 aaPredicted RBP9.44□□□□□ -0.9
CECR3-201ENST00000428828 SPRY3O43610 288 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 CD33P20138 364 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 COX19Q49B96 90 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 CALHM1Q8IU99 346 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 ZDHHC23Q8IYP9 409 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 OR2Z1Q8NG97 314 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 OR4P4Q8NGL7 312 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 PP6455Q8WZ26 134 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 DYRK2Q92630 601 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 UHRF2Q96PU4 802 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 DYSFO75923 2080 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 CDIPTO14735 213 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 PDE6DO43924 150 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 GOSR1O95249 250 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
CECR3-201ENST00000428828 HERV-K104P61576 105 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 RHOBP62745 196 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 C6orf201Q7Z4U5 140 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 BAGE3Q86Y29 109 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 ZNF525Q8N782 197 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 TXNDC17Q9BRA2 123 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 TANC2Q9HCD6 1990 aa9.44□□□□□ -0.9
CECR3-201ENST00000428828 B9A039 149 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 DEGS1O15121 323 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 ADAM20O43506 726 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 MT-ND6P03923 174 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 GPM6AP51674 278 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 HBG1P69891 147 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 HBG2P69892 147 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 CNN3Q15417 329 aaKnown RBP9.43□□□□□ -0.9
CECR3-201ENST00000428828 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 RSG1Q9BU20 258 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 WDR61Q9GZS3 305 aaKnown RBP9.43□□□□□ -0.9
CECR3-201ENST00000428828 VSIRQ9H7M9 311 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 UBE2J1Q9Y385 318 aaPredicted RBP9.43□□□□□ -0.9
CECR3-201ENST00000428828 MPC1Q9Y5U8 109 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 NBPF19A0A087WUL8 3843 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 FBN2P35556 2912 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 S1PR2O95136 353 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 KRTDAPP60985 99 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 EFNB3Q15768 340 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
CECR3-201ENST00000428828 TMEM42Q69YG0 159 aa9.43□□□□□ -0.9
CECR3-201ENST00000428828 Q6ZS49 121 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms