RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 TNXAQ16473 311 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 SLC51BQ86UW2 128 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 MRPL41Q8IXM3 137 aaKnown RBP10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 SSX3Q99909 188 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 U3KQ87 197 aa10.14□□□□□ -0.79
HMGB3P4-201ENST00000428776 FCN1O00602 326 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 CST7O76096 145 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 IFNA10P01566 189 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 RPL27AP46776 148 aaKnown RBP10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 HBG1P69891 147 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 HBG2P69892 147 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 FBLN7Q53RD9 439 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 CLEC9AQ6UXN8 241 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 RBM14Q96PK6 669 aaKnown RBP10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 SOX21Q9Y651 276 aaPredicted RBP10.13□□□□□ -0.79
HMGB3P4-201ENST00000428776 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 CGB1A6NKQ9 187 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 CNIH1O95406 144 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 CA2P00918 260 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 METTL15P1P0C7V9 234 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 SNCAP37840 140 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 HTR2BP41595 481 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 GNB1P62873 340 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 EIF5AP63241 154 aaKnown RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 ERHP84090 104 aaKnown RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 IFITM2Q01629 132 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 KRTAP1-1Q07627 177 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 TMEM267Q0VDI3 215 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 C10orf55Q5SWW7 151 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 ZNF562Q6V9R5 426 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 HSD17B13Q7Z5P4 300 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 STPG2Q8N412 459 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 Q8N9W7 124 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR10W1Q8NGF6 305 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR1S2Q8NGQ3 325 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR5C1Q8NGR4 320 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 SRSF8Q9BRL6 282 aaKnown RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 ZNF471Q9BX82 626 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 CYTL1Q9NRR1 136 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 PITPNC1Q9UKF7 332 aa10.12□□□□□ -0.79
HMGB3P4-201ENST00000428776 BORCS7-ASMTA0A0B4J1R7 106 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 A0A1B0GW64 132 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 E7EUB6 86 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 H3BUX3 64 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 JTBO76095 146 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 HLA-DRB1P01911 266 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SUB1P53999 127 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 RAB11AP62491 216 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 UBA52P62987 128 aaKnown RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SSBP2P81877 361 aaPredicted RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 FXYD3Q14802 87 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 BSXQ3C1V8 233 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 BCL6BQ8N143 479 aaPredicted RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 TMEM217Q8N7C4 229 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR10P1Q8NGE3 313 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 STOML3Q8TAV4 291 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SRSF12Q8WXF0 261 aaKnown RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 PINX1Q96BK5 328 aaKnown RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SLC25A33Q9BSK2 321 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 SMIM3Q9BZL3 60 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 MOB4Q9Y3A3 225 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 OTOGQ6ZRI0 2925 aa10.11□□□□□ -0.79
HMGB3P4-201ENST00000428776 A6NDX4 124 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 PMS2P5A8MQ11 134 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 FGF16O43320 207 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 DFFBO76075 338 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR8U8P0C7N1 319 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 NPY1RP25929 384 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 WT1-ASQ06250 92 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 C2orf83Q53S99 150 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 RPL7L1Q6DKI1 246 aaKnown RBP10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 C16orf82Q7Z2V1 217 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 HAPLN4Q86UW8 402 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 UBAC2Q8NBM4 344 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 ST8SIA2Q92186 375 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 PRDM13Q9H4Q3 707 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 WFDC1Q9HC57 220 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
HMGB3P4-201ENST00000428776 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 TEX22C9J3V5 150 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 M0QZK8 103 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 RGS13O14921 159 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 IFNA7P01567 189 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR13C7P0DN81 318 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 RNASE2P10153 161 aaKnown RBP10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 IER3P46695 156 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms