RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 PCGF1Q9BSM1 259 aa16.43■□□□□ 0.22
PMPCB-202ENST00000428154 GAR1Q9NY12 217 aaKnown RBP16.43■□□□□ 0.22
PMPCB-202ENST00000428154 TEX50A0A1B0GTY4 177 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 ARL14EPLP0DKL9 152 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 USF1P22415 310 aaPredicted RBP16.42■□□□□ 0.22
PMPCB-202ENST00000428154 EFNB3Q15768 340 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 GCSAMLQ5JQS6 135 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 NCMAPQ5T1S8 102 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 TMEM200BQ69YZ2 307 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 CACNG8Q8WXS5 425 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 C1orf159Q96HA4 380 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 FRYQ5TBA9 3013 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 A0A087X0M5 115 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 A0A1B0GX30 115 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 A0A1W2PN81 502 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 CHRNA7P36544 502 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 ZNF137PP52743 207 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 FAM3BP58499 235 aaPredicted RBP16.42■□□□□ 0.22
PMPCB-202ENST00000428154 LCN2P80188 198 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 SNRNP40Q96DI7 357 aaKnown RBP16.42■□□□□ 0.22
PMPCB-202ENST00000428154 DCAF16Q9NXF7 216 aa16.42■□□□□ 0.22
PMPCB-202ENST00000428154 PPP5D1E7EU14 171 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 H0YJW9 148 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 GGCTO75223 188 aaKnown RBP16.41■□□□□ 0.22
PMPCB-202ENST00000428154 FSTL3O95633 263 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 TYMSP04818 313 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 TRGC1P0CF51 173 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 GPX4P36969 197 aaPredicted RBP16.41■□□□□ 0.22
PMPCB-202ENST00000428154 GNB1P62873 340 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 ERHP84090 104 aaKnown RBP16.41■□□□□ 0.22
PMPCB-202ENST00000428154 OR4C13Q8NGP0 309 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 ABHD5Q8WTS1 349 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 FLYWCH2Q96CP2 140 aaKnown RBP16.41■□□□□ 0.22
PMPCB-202ENST00000428154 DYNLRB1Q9NP97 96 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 PITPNC1Q9UKF7 332 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 SLC45A2Q9UMX9 530 aa16.41■□□□□ 0.22
PMPCB-202ENST00000428154 B9A039 149 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 PHOX2AO14813 284 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 IGKV1-16P04430 117 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
PMPCB-202ENST00000428154 AREGP15514 252 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 NPPCP23582 126 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 GCHFRP30047 84 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 APOBEC3AP31941 199 aaPredicted RBP16.4■□□□□ 0.22
PMPCB-202ENST00000428154 LINC01551Q86U37 167 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 FRZBQ92765 325 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 HARBI1Q96MB7 349 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 WFIKKN1Q96NZ8 548 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 HINT2Q9BX68 163 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 COMMD5Q9GZQ3 224 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 TMEM167BQ9NRX6 74 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 LY96Q9Y6Y9 160 aa16.4■□□□□ 0.22
PMPCB-202ENST00000428154 TRBV23-1A0A0A0MS06 115 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 SRRM4A7MD48 611 aaKnown RBP16.39■□□□□ 0.21
PMPCB-202ENST00000428154 SHISA9B4DS77 424 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 IL3RAP26951 378 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 MC5RP33032 325 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 DNLZQ5SXM8 178 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 TMEM167AQ8TBQ9 72 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 CCL17Q92583 94 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 TNFRSF14Q92956 283 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 UHRF2Q96PU4 802 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 RNF2Q99496 336 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 LRFN3Q9BTN0 628 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
PMPCB-202ENST00000428154 OR51M1Q9H341 326 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 ATP5G3P48201 142 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 RPL8P62917 257 aaKnown RBP16.39■□□□□ 0.21
PMPCB-202ENST00000428154 SLC16A13Q7RTY0 426 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 ZGRF1Q86YA3 2104 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 SSMEM1Q8WWF3 244 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 NIT2Q9NQR4 276 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 NDUFA4L2Q9NRX3 87 aa16.39■□□□□ 0.21
PMPCB-202ENST00000428154 NDUFB4O95168 129 aa16.38■□□□□ 0.21
PMPCB-202ENST00000428154 RNASE2P10153 161 aaKnown RBP16.38■□□□□ 0.21
PMPCB-202ENST00000428154 OR9G1Q8NH87 305 aa16.38■□□□□ 0.21
PMPCB-202ENST00000428154 C11orf52Q96A22 123 aa16.38■□□□□ 0.21
PMPCB-202ENST00000428154 FUT9Q9Y231 359 aa16.38■□□□□ 0.21
PMPCB-202ENST00000428154 YLPM1P49750 1951 aaKnown RBP16.38■□□□□ 0.21
PMPCB-202ENST00000428154 LOC400499M0QZD8 3231 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 E7EQL1 145 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 DLL1O00548 723 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 LINC00869P0C866 280 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 DEFA4P12838 97 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 IGFBP2P18065 325 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 SUB1P53999 127 aaKnown RBP eCLIP16.37■□□□□ 0.211e-13■□□□□ 10
PMPCB-202ENST00000428154 CASP6P55212 293 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 TAS2R45P59539 299 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 UBE2G2P60604 165 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 CD69Q07108 199 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 FOXC1Q12948 553 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 MRPL41Q8IXM3 137 aaKnown RBP16.37■□□□□ 0.21
PMPCB-202ENST00000428154 H1FXQ92522 213 aaKnown RBP16.37■□□□□ 0.21
PMPCB-202ENST00000428154 NABP2Q9BQ15 211 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 SH3BGRL2Q9UJC5 107 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 WASHC3Q9Y3C0 194 aa16.37■□□□□ 0.21
PMPCB-202ENST00000428154 CD3EP07766 207 aa16.36■□□□□ 0.21
PMPCB-202ENST00000428154 CCL3L1P16619 93 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms