RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 IGHV3-35A0A0C4DH35 117 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 SAA1P0DJI8 122 aaPredicted RBP4.86□□□□□ -1.63
HERC4-206ENST00000427635 RIPPLY3P57055 190 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 LCN12Q6JVE5 192 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 RNF167Q9H6Y7 350 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 RETNQ9HD89 108 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 DKK4Q9UBT3 224 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 TJP1Q07157 1748 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 C7orf71A4D174 169 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 FAM74A7A6NL05 159 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
HERC4-206ENST00000427635 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 RCC2Q9P258 522 aaKnown RBP4.86□□□□□ -1.63
HERC4-206ENST00000427635 TSPAN2O60636 221 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 C8orf88P0DMB2 117 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 MAVSQ7Z434 540 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 OR4D5Q8NGN0 318 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 FRRS1LQ9P0K9 344 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 PLXNB2O15031 1838 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 TCRBV5S1A1TA0A578 114 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 TEX22C9J3V5 150 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 NBR2O15453 112 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 OTX1P32242 354 aaPredicted RBP4.86□□□□□ -1.63
HERC4-206ENST00000427635 CYP2G1PQ6ZSU1 146 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.86□□□□□ -1.63
HERC4-206ENST00000427635 NUMA1Q14980 2115 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 PSPNO60542 156 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 MPC2O95563 127 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 NCMAPQ5T1S8 102 aa4.86□□□□□ -1.63
HERC4-206ENST00000427635 TAF15Q92804 592 aaKnown RBP eCLIP4.86□□□□□ -1.63
HERC4-206ENST00000427635 IGKV3D-20A0A0C4DH25 116 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 OR11H12B2RN74 326 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 FCN3O75636 299 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 NAPSAO96009 420 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 HLA-DRB1P01911 266 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 PEBP1P30086 187 aaKnown RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 NPBWR2P48146 333 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 C4orf48Q5BLP8 95 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 LINC00305Q7Z4B0 112 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 MED19A0JLT2 244 aaPredicted RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 SOD3P08294 240 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 SNRPCP09234 159 aaKnown RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 KIAA1644Q3SXP7 199 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 ZNF324BQ6AW86 544 aaPredicted RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 FAM71F2Q6NXP2 309 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 LCNL1Q6ZST4 164 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 GOLT1AQ6ZVE7 132 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 DRAM1Q8N682 238 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 CFHR4Q92496 578 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 GGACTQ9BVM4 153 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 PRO1933Q9H354 126 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 GOLGA4Q13439 2230 aaKnown RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 TCRBV5S2A0A599 114 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 ID3Q02535 119 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 WDR82Q6UXN9 313 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 PHYHIPLQ96FC7 376 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 IGHV2OR16-5A0A0B4J2B6 119 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 SERF2P84101 59 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 EIF4EBP2Q13542 120 aaPredicted RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 SLC25A47Q6Q0C1 308 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 CD300LDQ6UXZ3 194 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 VN1R17PQ8TDU5 208 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 ABCA3Q99758 1704 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
HERC4-206ENST00000427635 ACP7Q6ZNF0 438 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 TMEM136Q6ZRR5 245 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 VMO1Q7Z5L0 202 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 FAM90A1Q86YD7 464 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 SLC50A1Q9BRV3 221 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 ST20Q9HBF5 79 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 TMEM30AQ9NV96 361 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 ADAMTS7Q9UKP4 1686 aa4.85□□□□□ -1.63
HERC4-206ENST00000427635 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.84□□□□□ -1.63
HERC4-206ENST00000427635 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 ZNF561-AS1K7EIQ3 104 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 CECR9P0C854 216 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 Q71RC1 249 aaPredicted RBP4.84□□□□□ -1.63
HERC4-206ENST00000427635 RIMKLAQ8IXN7 391 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 C10orf126Q8N4M7 172 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 HDHD3Q9BSH5 251 aaPredicted RBP4.84□□□□□ -1.63
HERC4-206ENST00000427635 MRPL20Q9BYC9 149 aaKnown RBP4.84□□□□□ -1.63
HERC4-206ENST00000427635 S4R3C0 116 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 RNF144BQ7Z419 303 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 HOGA1Q86XE5 327 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 OR10AG1Q8NH19 301 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
HERC4-206ENST00000427635 RCHY1Q96PM5 261 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 JPT2Q9H910 190 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 NEU3Q9UQ49 428 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 SPTA1P02549 2419 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 RRHO14718 337 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 ZNHIT1O43257 154 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 GLIPR1P48060 266 aa4.84□□□□□ -1.63
HERC4-206ENST00000427635 DAD1P61803 113 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms