RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 JPT1Q9UK76 154 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
SPG11-202ENST00000427534 SCN4AP35499 1836 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 THBDP07204 575 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 CD7P09564 240 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 ERASQ7Z444 233 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 RPS11P62280 158 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPG11-202ENST00000427534 GALNT14Q96FL9 552 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 SRIP30626 198 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 HOXA6P31267 233 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 PRR30Q53SZ7 412 aaPredicted RBP11.08□□□□□ -0.64
SPG11-202ENST00000427534 CHRNA10Q9GZZ6 450 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 LYRM7Q5U5X0 104 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 A0A087WV48 116 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 DNM1P46Q6ZS02 220 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 TEX45Q8NA69 505 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 ASCL2Q99929 193 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 SEMA5BQ9P283 1151 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 SLC17A3O00476 420 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 CYP2G1PQ6ZSU1 146 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
SPG11-202ENST00000427534 C5orf66Q9H5L9 145 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 C12orf77C9JDV5 145 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 TCF21O43680 179 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 PKIBQ9C010 78 aa11.08□□□□□ -0.64
SPG11-202ENST00000427534 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 FAM74A3Q4VXF1 159 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 C8orf88P0DMB2 117 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 GLRXP35754 106 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
SPG11-202ENST00000427534 RNASE6Q93091 150 aaKnown RBP11.07□□□□□ -0.64
SPG11-202ENST00000427534 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
SPG11-202ENST00000427534 ELOA3CA0A087WX78 387 aaPredicted RBP11.07□□□□□ -0.64
SPG11-202ENST00000427534 C17orf100A8MU93 164 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 NEUROG1Q92886 237 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
SPG11-202ENST00000427534 SCN5AQ14524 2016 aa11.07□□□□□ -0.64
SPG11-202ENST00000427534 TRAV30A0A087WSZ9 112 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
SPG11-202ENST00000427534 EVI2AP22794 236 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 ZP1P60852 638 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 Q96M66 194 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 THADAQ6YHU6 1953 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 COX5BP10606 129 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 SELLP14151 372 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 IFT22Q9H7X7 185 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 CABIN1Q9Y6J0 2220 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 TCF20Q9UGU0 1960 aaKnown RBP11.06□□□□□ -0.64
SPG11-202ENST00000427534 A6NDN8 102 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
SPG11-202ENST00000427534 NDPQ00604 133 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 C10orf128Q5T292 105 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 VMO1Q7Z5L0 202 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 SOD3P08294 240 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 CD59P13987 128 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 PTGDSP41222 190 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 COX19Q49B96 90 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 NPDC1Q9NQX5 325 aaPredicted RBP11.06□□□□□ -0.64
SPG11-202ENST00000427534 CACNA1GO43497 2377 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 VGLL1Q99990 258 aa11.06□□□□□ -0.64
SPG11-202ENST00000427534 FOXG1P55316 489 aaPredicted RBP11.05□□□□□ -0.64
SPG11-202ENST00000427534 ASCL4Q6XD76 172 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 HLA-DRB1P01911 266 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 ZNF708P17019 499 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 CENPWQ5EE01 88 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 ZNF385CQ66K41 422 aaPredicted RBP11.05□□□□□ -0.64
SPG11-202ENST00000427534 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
SPG11-202ENST00000427534 KIR2DL4Q99706 377 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 ASIPP42127 132 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 CFHR1Q03591 330 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SMAGPQ0VAQ4 97 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 AICDAQ9GZX7 198 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 C21orf62Q9NYP8 219 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 WNK3Q9BYP7 1800 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 NPIPB13A6NJU9 1138 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 NPIPB4C9JG80 1138 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SERF2P84101 59 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SAA2-SAA4A0A096LPE2 208 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SAA2P0DJI9 122 aaPredicted RBP11.05□□□□□ -0.64
SPG11-202ENST00000427534 MPTX1A8MV57 137 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SAXO1Q8IYX7 474 aa11.05□□□□□ -0.64
SPG11-202ENST00000427534 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms