RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 A0A1B0GX12 115 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1W2PNN7 141 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1W2PQL4 384 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TRAPPC13A5PLN9 417 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CPSF4LA6NMK7 179 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 C2orf74A8MZ97 194 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 D6RAR5 112 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 K7ERS5 55 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 M0R129 80 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 NDUFS8O00217 210 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 UPK2O00526 184 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 BHLHE40O14503 412 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CDC42EP2O14613 210 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 PLA2G10O15496 165 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CHP2O43745 196 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 COX7A2P2O60397 106 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SOX14O95416 240 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 NSA2O95478 260 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 FSTL3O95633 263 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 GPR75O95800 540 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TNFP01375 233 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1D-16P01601 117 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IGHG2P01859 326 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TSPAN19P0C672 248 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 GIMD1P0DJR0 217 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 INAFM2P0DMQ5 153 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IL7P13232 177 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CPMP14384 443 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SPNP16150 400 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 UGT2B7P16662 529 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MYL12AP19105 171 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 S100A1P23297 94 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 F8A1P23610 371 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IL12BP29460 328 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LCN1P31025 176 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SDC2P34741 201 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 GABRA4P48169 554 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 EIF2B2P49770 351 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ETV1P50549 477 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 RAB38P57729 211 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 RAB25P57735 213 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 OR2B6P58173 313 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TAS2R41P59536 307 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 RAB8AP61006 207 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SKP1P63208 163 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 UBE2IP63279 158 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 BTN3A2P78410 334 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 FABP5Q01469 135 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IFITM2Q01629 132 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 HTR4Q13639 388 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 KCNJ8Q15842 424 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF141Q15928 474 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MAPK14Q16539 360 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TAF9Q16594 264 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM241Q24JQ0 296 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LGALSLQ3ZCW2 172 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CCDC58Q4VC31 144 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 HSD17B12Q53GQ0 312 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TRMT12Q53H54 448 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LDLRAD2Q5SZI1 272 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MRPL2Q5T653 305 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 HBMQ6B0K9 141 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SMARCD3Q6STE5 483 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF322Q6U7Q0 402 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM91Q6ZNR0 172 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF550Q7Z398 422 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LINC00596Q86U02 117 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 AKAP14Q86UN6 197 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SNX29P2Q8IUI4 249 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 GID4Q8IVV7 300 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TCTE3Q8IZS6 198 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SYS1Q8N2H4 156 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF664Q8N3J9 261 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 C2orf73Q8N5S3 287 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LINC00337Q8N6G1 96 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ACBD7Q8N6N7 88 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CDRT4Q8N9R6 151 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 OR4E2Q8NGC2 313 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 OR8S1Q8NH09 359 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TEX47Q8TBZ9 253 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 RPS4Y2Q8TD47 263 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 HAVCR2Q8TDQ0 301 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM239Q8WW34 195 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LCN9Q8WX39 176 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CACNG8Q8WXS5 425 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SLC7A6Q92536 515 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 AP3S1Q92572 193 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TNFRSF14Q92956 283 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 FXYD5Q96DB9 178 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MSANTD3Q96H12 275 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CEP19Q96LK0 163 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 YPEL4Q96NS1 127 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SPACA5Q96QH8 159 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 GPX7Q96SL4 187 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 C7orf50Q9BRJ6 194 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 HINT2Q9BX68 163 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SLC19A3Q9BZV2 496 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SLC22A4Q9H015 551 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms