RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 SPAARA0A1B0GVQ0 90 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 MKRN2OSH3BPM6 223 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 CXorf1O96002 111 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 GCGP01275 180 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 NPY1RP25929 384 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 TAS2R60P59551 318 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 PSG5Q15238 335 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 C22orf34Q6ZV56 151 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 LHFPL4Q7Z7J7 247 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
ERCC3-202ENST00000426778 GCM1Q9NP62 436 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 TMPRSS2O15393 492 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 TNFSF13O75888 250 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 CRYBB3P26998 211 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 CDKN1AP38936 164 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 RPL29P47914 159 aaKnown RBP11.81□□□□□ -0.52
ERCC3-202ENST00000426778 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 FAM216BQ8N7L0 139 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
ERCC3-202ENST00000426778 ZNF292O60281 2723 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 GUSBP1Q15486 140 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 TEPPQ6URK8 271 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 BHLHA15Q7RTS1 189 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 OR8I2Q8N0Y5 310 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 CCL13Q99616 98 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 DKK4Q9UBT3 224 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 APC2O95996 2303 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 RAI1Q7Z5J4 1906 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 IGKV1OR2-108A0A075B7D4 117 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 MGST3O14880 152 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 SERF1AO75920 110 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 REG1BP48304 166 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 LINC00310P59036 64 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 TRIP6Q15654 476 aaKnown RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 C17orf58Q2M2W7 97 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 TOMM20LQ6UXN7 152 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 SNHG12Q9BXW3 62 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 JPT1Q9UK76 154 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 CA1P00915 261 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 LCN2P80188 198 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 IQCJQ1A5X6 159 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 CMTM2Q8TAZ6 248 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
ERCC3-202ENST00000426778 PROCRQ9UNN8 238 aa11.8□□□□□ -0.52
ERCC3-202ENST00000426778 C15orf61A6NNL5 157 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 SRRM4A7MD48 611 aaKnown RBP11.79□□□□□ -0.52
ERCC3-202ENST00000426778 FCN1O00602 326 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 OR7C2O60412 319 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 PAX1P15863 534 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 SEM1Q6ZVN7 128 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 OR1L6Q8NGR2 347 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 RAB1CQ92928 201 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 NAGKQ9UJ70 344 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 TP53TG5Q9Y2B4 290 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 LSM4Q9Y4Z0 139 aaKnown RBP11.79□□□□□ -0.52
ERCC3-202ENST00000426778 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 YPEL1O60688 119 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 RAB4BP61018 213 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
ERCC3-202ENST00000426778 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
ERCC3-202ENST00000426778 ZNF705AQ6ZN79 300 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-202ENST00000426778 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 Q6ZWC4 215 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 TCTEX1D1Q8N7M0 179 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 IDI2-AS1Q9NZ38 188 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 PAM16Q9Y3D7 125 aa11.79□□□□□ -0.52
ERCC3-202ENST00000426778 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 IGHG3P01860 377 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 FOXL1Q12952 345 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 OR9G1Q8NH87 305 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 LINC00479Q96M42 142 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 PRR33A8MZF0 331 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 DNLZQ5SXM8 178 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 BAGE3Q86Y29 109 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 BAGE2Q86Y30 109 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 DDB2Q92466 427 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 NOL4LQ96MY1 436 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-202ENST00000426778 DYSFO75923 2080 aa11.78□□□□□ -0.52
ERCC3-202ENST00000426778 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 M0R296 226 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 IGLV1-44P01699 117 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 RHOBP62745 196 aa11.77□□□□□ -0.52
ERCC3-202ENST00000426778 CENPWQ5EE01 88 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms