RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CLCF1Q9UBD9 225 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TECTAO75443 2155 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 HELTA6NFD8 242 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 AHRRA9YTQ3 701 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 YPEL1O60688 119 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR10J4P0C629 311 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 CD59P13987 128 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 CDKN1AP38936 164 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 KRTDAPP60985 99 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 HSPE1P61604 102 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TRIP6Q15654 476 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 MLANAQ16655 118 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR4A47Q6IF82 309 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 PQLC2Q6ZP29 291 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR52E5Q8NH55 327 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR4S2Q8NH73 311 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 EAF1Q96JC9 268 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 YPEL2Q96QA6 119 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 NEU1Q99519 415 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 RNASE7Q9H1E1 156 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 ZFHX4Q86UP3 3567 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 PCNX2A6NKB5 2137 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 HCFC1P51610 2035 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 MGST1P10620 155 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 GNG4P50150 75 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 LOXL3P58215 753 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 SRSF6Q13247 344 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 RPEL1Q2QD12 228 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 CT45A1Q5HYN5 189 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 ASPHD1Q5U4P2 390 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 GCSAMQ8N6F7 178 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR5AU1Q8NGC0 362 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 CT45A3Q8NHU0 189 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR2V2Q96R30 315 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 PLEKHA3Q9HB20 300 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 PLCE1Q9P212 2302 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 IGHV1-18A0A0C4DH31 117 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 A6NNC1 897 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 PAFAH1B2P68402 229 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 MRPS11P82912 194 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 MSMPQ1L6U9 139 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 CENPWQ5EE01 88 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 FAM90A1Q86YD7 464 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 INTS1Q8N201 2190 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 BOD1L1Q8NFC6 3051 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 C15orf61A6NNL5 157 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 SRRM5B3KS81 715 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 TMPRSS3P57727 454 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 LINC00310P59036 64 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 DUX4L9Q6RFH8 374 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 SIGLECL1Q8N7X8 197 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 ST6GALNAC3Q8NDV1 305 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 NABP2Q9BQ15 211 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 OR51B2Q9Y5P1 312 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 KMT2EQ8IZD2 1858 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 SAA2-SAA4A0A096LPE2 208 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 FAM90A9PA6NNJ1 464 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 J3QR06 171 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 M0R1B8 84 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 SAA2P0DJI9 122 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 TDGF1P3P51864 188 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 LGALS4P56470 323 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 FDCSPQ8NFU4 85 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNRD1Q9P1U0 126 aa6.19□□□□□ -1.42
SMARCC1-202ENST00000425518 ABCA1O95477 2261 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF883P0CG24 379 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 IRF2P14316 349 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 PMCHP20382 165 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 RANP62826 216 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 MZT1Q08AG7 82 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 TIGITQ495A1 244 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 NHLRC2Q8NBF2 726 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 ARFGEF3Q5TH69 2177 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 TRGV10A0A0A0MS01 117 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 KIR2DL5BA0A0G2JN68 375 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 KIR2DL5BA0A0G2JPC4 375 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 C19orf67A6NJJ6 358 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 RAB4AP20338 218 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 KIR2DL5AQ8N109 375 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 ITLN1Q8WWA0 313 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 GNB4Q9HAV0 340 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 IDI2-AS1Q9NZ38 188 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 IL19Q9UHD0 177 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 CDX4O14627 284 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 SELENOTP62341 195 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 TPTE2P1Q5T6R2 138 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 BHLHA15Q7RTS1 189 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 RND1Q92730 232 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 SLC45A2Q9UMX9 530 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 PROCRQ9UNN8 238 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 V9GYV3 84 aa6.18□□□□□ -1.42
SMARCC1-202ENST00000425518 F2RL2O00254 374 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms