RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HINT2Q9BX68 163 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DIABLOQ9NR28 239 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CCL28Q9NRJ3 127 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C21orf62Q9NYP8 219 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 EPPK1P58107 5090 aaKnown RBP9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 NOTOA8MTQ0 251 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C11orf94C9JXX5 98 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DNASE2O00115 360 aaPredicted RBP9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SERPINE2P07093 398 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CTSDP07339 412 aaPredicted RBP9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CBX5P45973 191 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 PLA2G7Q13093 441 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 AADACL3Q5VUY0 350 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C19orf35Q6ZS72 473 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 GDPD1Q8N9F7 314 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 BEST4Q8NFU0 473 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR13F1Q8NGS4 319 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 GINS3Q9BRX5 216 aa9.09□□□□□ -0.95
HLA-DQB3-203ENST00000425319 IGKV1D-13A0A0B4J2D9 117 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM235A6NFC5 223 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SULT1C2O00338 296 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DEDDO75618 318 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGKV1-13P0DP09 117 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 HERV-K104P61576 105 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM187Q14656 261 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 C22orf42Q6IC83 251 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CMTM1Q8IZ96 169 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM116Q8NCL8 245 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR11H2Q8NH07 326 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NUDCD2Q8WVJ2 157 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TSC22D3Q99576 134 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 COMMD9Q9P000 198 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SSR3Q9UNL2 185 aa9.08□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TRAV14DV4A0A0A6YYC5 116 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 PPYP01298 95 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TFPI2P48307 235 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 HSPA13P48723 471 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 MFAP4P55083 255 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 FXYD4P59646 89 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TBCEQ15813 527 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 GIMAP1Q8WWP7 306 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TXN2Q99757 166 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 RHPN1-AS1Q9BWJ2 59 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM231Q9H6L2 316 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM140Q9NV12 185 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NDUFB11Q9NX14 153 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SMPXQ9UHP9 88 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DAPK2Q9UIK4 370 aa9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ELF5Q9UKW6 265 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SACSQ9NZJ4 4579 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TRAV18A0A075B6X5 111 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 A0A0A6YYH2 397 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TEX50A0A1B0GTY4 177 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 A6NJ64 397 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGLL5B9A064 214 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DFFBO76075 338 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SCAND1P57086 179 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM41BQ5BJD5 291 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 HOGA1Q86XE5 327 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DUSP18Q8NEJ0 188 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR51H1Q8NH63 302 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SCARB1Q8WTV0 552 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 PRNDQ9UKY0 176 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR51B2Q9Y5P1 312 aa9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 F11RQ9Y624 299 aaKnown RBP9.06□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 A0A1B0GW64 132 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ZNF207O43670 478 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 F2RP25116 425 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ERHP84090 104 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 EWSR1Q01844 656 aaKnown RBP eCLIP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ODF3L2Q3SX64 289 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 LINC00336Q6ZUF6 198 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 STHQ8IWL8 128 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR5AP2Q8NGF4 316 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR10W1Q8NGF6 305 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 KRTAP17-1Q9BYP8 105 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IFT46Q9NQC8 304 aa9.05□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGKV3-7A0A075B6H7 116 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 A0A1W2PS18 150 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 MARCH11A6NNE9 402 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CHEK1O14757 476 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 GNG7O60262 68 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CA1P00915 261 aaPredicted RBP9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 KRASP01116 189 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms