RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 ZNF355PQ9NSJ1 428 aa9.38□□□□□ -0.91
SEC61A1-202ENST00000424880 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 HELTA6NFD8 242 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 A6NJY4 79 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 CXCL13O43927 109 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 RHOBP62745 196 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 NHLH1Q02575 133 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 RBPJQ06330 500 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 FAM216AQ8WUB2 273 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 SPACA9Q96E40 222 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 MGST2Q99735 147 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 PIGBOS1A0A0B4J2F0 54 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 G3V4G9 280 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 MFAP2P55001 183 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 CX3CL1P78423 397 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 SRYQ05066 204 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 SRSF7Q16629 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 SSX8Q7RTT4 187 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 OR1N2Q8NGR9 330 aa9.37□□□□□ -0.91
SEC61A1-202ENST00000424880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 LINC00473A8K010 186 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 H0YJW9 148 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 GCHFRP30047 84 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 UBE2G1P62253 170 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 PSG5Q15238 335 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 MIR17HGQ75NE6 70 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 MOB3BQ86TA1 216 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 SRD5A2P31213 254 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 LGALS7P47929 136 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 TMEM249Q2WGJ8 235 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 SLC25A53Q5H9E4 307 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 HEYLQ9NQ87 328 aaPredicted RBP9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 HCFC1P51610 2035 aa9.36□□□□□ -0.91
SEC61A1-202ENST00000424880 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 A0A0G2JMM0 328 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 A0A1W2PPB8 328 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 KIR3DP1A8MWS1 328 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 M0R1X1 148 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 NEURL1O76050 574 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 ZFAND5O76080 213 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 CER1O95813 267 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 APOA2P02652 100 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 OR9G9P0C7N8 305 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 STAG3L2P0CL84 134 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 STAG3L3P0CL85 134 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 PAX2Q02962 417 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 IBA57Q5T440 356 aaKnown RBP9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 LINC00696Q6ZRV3 163 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 OR52E5Q8NH55 327 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 C2orf70A6NJV1 201 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 CXorf1O96002 111 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 MYOD1P15172 320 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 CT55Q8WUE5 264 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 OR2H2O95918 312 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 AESQ08117 197 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 EFNB3Q15768 340 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 CEACAM21Q3KPI0 293 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 ZNF718Q3SXZ3 478 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 OR8B3Q8NGG8 313 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 WDR83OSQ9Y284 106 aa9.35□□□□□ -0.91
SEC61A1-202ENST00000424880 IGLC1P0CG04 106 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 PSG3Q16557 428 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 C17orf82Q86X59 251 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 DCTN5Q9BTE1 182 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 GGTLC1Q9BX51 225 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 TNFRSF19Q9NS68 423 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 OR7C2O60412 319 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 MT-ND6P03923 174 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 CPT1CQ8TCG5 803 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 TMEM45BQ96B21 275 aa9.34□□□□□ -0.91
SEC61A1-202ENST00000424880 GAGE10A6NGK3 116 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 CDIPTO14735 213 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 AMY1AP04745 511 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms