RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 TRAV3A0A0B4J244 114 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 SLC17A3O00476 420 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CA2P00918 260 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 LHBP01229 141 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 AMY1AP04745 511 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CECR9P0C854 216 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 IRF2P14316 349 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 PPOXP50336 477 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 C2orf83Q53S99 150 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-204ENST00000424143 C1orf210Q8IVY1 113 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 SSMEM1Q8WWF3 244 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 KCNS1Q96KK3 526 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 DCTN5Q9BTE1 182 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 TRIOO75962 3097 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-204ENST00000424143 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 ZNF253O75346 499 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 ZNF134P52741 427 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 ARG2P78540 354 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 COL5A1-AS1Q5SY13 56 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 VASH2Q86V25 355 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 TPRX1Q8N7U7 411 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 NABP2Q9BQ15 211 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 MSL2Q9HCI7 577 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
C9orf3-204ENST00000424143 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 UPK2O00526 184 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 CGAP01215 116 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 KIR2DL2P43627 348 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-204ENST00000424143 PRRX1P54821 245 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 OR8I2Q8N0Y5 310 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 CACNG8Q8WXS5 425 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 CHRDL1Q9BU40 450 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 DCAF16Q9NXF7 216 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
C9orf3-204ENST00000424143 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 C20orf202A1L168 122 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 IZUMO1RA6ND01 250 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 FOXH1O75593 365 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 SFTPCP11686 197 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 IGFBP2P18065 325 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 BMP5P22003 454 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 ZNF439Q8NDP4 499 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 VN1R17PQ8TDU5 208 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 DUSP13Q9UII6 198 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 DIRC3C9JPN6 131 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 IGHV3-13P01766 116 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 CDKN1AP38936 164 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 GATA4P43694 442 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 PSG5Q15238 335 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 KLHDC1Q8N7A1 406 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 OR5B3Q8NH48 314 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 ZNF503Q96F45 646 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 FAM234AQ9H0X4 552 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 LPAR2Q9HBW0 351 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 IL17BQ9UHF5 180 aa12.48□□□□□ -0.41
C9orf3-204ENST00000424143 A0A1W2PS18 150 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 TM4SF5O14894 197 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-204ENST00000424143 CRYBB3P26998 211 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 G0S2P27469 103 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 FABP6P51161 128 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 MRPS11P82912 194 aaKnown RBP12.47□□□□□ -0.41
C9orf3-204ENST00000424143 KLF5Q13887 457 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-204ENST00000424143 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 VKORC1L1Q8N0U8 176 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 ZFP30Q9Y2G7 519 aa12.47□□□□□ -0.41
C9orf3-204ENST00000424143 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms