RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 PRR20CP86479 221 aa8.83□□□□□ -1
USP54-204ENST00000422491 PRR20DP86480 221 aa8.83□□□□□ -1
USP54-204ENST00000422491 PRR20BP86481 221 aa8.83□□□□□ -1
USP54-204ENST00000422491 PRR20AP86496 221 aa8.83□□□□□ -1
USP54-204ENST00000422491 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
USP54-204ENST00000422491 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
USP54-204ENST00000422491 PRAMEF6Q5VXH4 476 aa8.83□□□□□ -1
USP54-204ENST00000422491 TEPPQ6URK8 271 aa8.83□□□□□ -1
USP54-204ENST00000422491 SMIM15Q7Z3B0 74 aa8.83□□□□□ -1
USP54-204ENST00000422491 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
USP54-204ENST00000422491 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
USP54-204ENST00000422491 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
USP54-204ENST00000422491 SLC25A10Q9UBX3 287 aaPredicted RBP8.83□□□□□ -1
USP54-204ENST00000422491 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
USP54-204ENST00000422491 IGHV3-43A0A0B4J1X8 118 aa8.83□□□□□ -1
USP54-204ENST00000422491 AHRRA9YTQ3 701 aa8.83□□□□□ -1
USP54-204ENST00000422491 IGHV3-43DP0DP04 118 aa8.83□□□□□ -1
USP54-204ENST00000422491 SSTR5P35346 364 aa8.83□□□□□ -1
USP54-204ENST00000422491 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
USP54-204ENST00000422491 PSG5Q15238 335 aa8.83□□□□□ -1
USP54-204ENST00000422491 Q6ZR03 302 aa8.83□□□□□ -1
USP54-204ENST00000422491 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
USP54-204ENST00000422491 ERASQ7Z444 233 aa8.83□□□□□ -1
USP54-204ENST00000422491 OR4A16Q8NH70 328 aa8.83□□□□□ -1
USP54-204ENST00000422491 PSG11Q9UQ72 335 aa8.83□□□□□ -1
USP54-204ENST00000422491 RNF24Q9Y225 148 aa8.83□□□□□ -1
USP54-204ENST00000422491 GGTLC3B5MD39 225 aa8.82□□□□□ -1
USP54-204ENST00000422491 M0R2Z0 102 aa8.82□□□□□ -1
USP54-204ENST00000422491 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
USP54-204ENST00000422491 DUTP33316 252 aaKnown RBP8.82□□□□□ -1
USP54-204ENST00000422491 MPV17L2Q567V2 206 aa8.82□□□□□ -1
USP54-204ENST00000422491 RASL11AQ6T310 242 aa8.82□□□□□ -1
USP54-204ENST00000422491 ZNF503Q96F45 646 aa8.82□□□□□ -1
USP54-204ENST00000422491 VPS25Q9BRG1 176 aa8.82□□□□□ -1
USP54-204ENST00000422491 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
USP54-204ENST00000422491 TRAV3A0A0B4J244 114 aa8.82□□□□□ -1
USP54-204ENST00000422491 CBY3A6NI87 242 aa8.82□□□□□ -1
USP54-204ENST00000422491 FCGR3BO75015 233 aa8.82□□□□□ -1
USP54-204ENST00000422491 PSG1P11464 419 aa8.82□□□□□ -1
USP54-204ENST00000422491 GABRA2P47869 451 aa8.82□□□□□ -1
USP54-204ENST00000422491 PPOXP50336 477 aa8.82□□□□□ -1
USP54-204ENST00000422491 SRYQ05066 204 aa8.82□□□□□ -1
USP54-204ENST00000422491 GDF5OSQ5U4N7 250 aa8.82□□□□□ -1
USP54-204ENST00000422491 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
USP54-204ENST00000422491 KIR3DL3Q8N743 410 aa8.82□□□□□ -1
USP54-204ENST00000422491 OR2Y1Q8NGV0 311 aa8.82□□□□□ -1
USP54-204ENST00000422491 FAM168AQ92567 244 aa8.82□□□□□ -1
USP54-204ENST00000422491 FAM122AQ96E09 287 aa8.82□□□□□ -1
USP54-204ENST00000422491 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
USP54-204ENST00000422491 TNFRSF19Q9NS68 423 aa8.82□□□□□ -1
USP54-204ENST00000422491 TRGV8A0A0C4DH27 118 aa8.81□□□□□ -1
USP54-204ENST00000422491 DEFB108AA8MXU0 73 aa8.81□□□□□ -1
USP54-204ENST00000422491 PRUNE2Q8WUY3 3088 aa8.81□□□□□ -1
USP54-204ENST00000422491 FREM2Q5SZK8 3169 aa8.81□□□□□ -1
USP54-204ENST00000422491 ACTL6BO94805 426 aa8.81□□□□□ -1
USP54-204ENST00000422491 IGFBP2P18065 325 aa8.81□□□□□ -1
USP54-204ENST00000422491 OTX2P32243 289 aa8.81□□□□□ -1
USP54-204ENST00000422491 HOXA4Q00056 320 aaPredicted RBP8.81□□□□□ -1
USP54-204ENST00000422491 NUDT10Q8NFP7 164 aa8.81□□□□□ -1
USP54-204ENST00000422491 OR13A1Q8NGR1 328 aa8.81□□□□□ -1
USP54-204ENST00000422491 IFI44Q8TCB0 444 aa8.81□□□□□ -1
USP54-204ENST00000422491 COMMD5Q9GZQ3 224 aa8.81□□□□□ -1
USP54-204ENST00000422491 SAP30LQ9HAJ7 183 aa8.81□□□□□ -1
USP54-204ENST00000422491 SERTAD4Q9NUC0 356 aa8.81□□□□□ -1
USP54-204ENST00000422491 TCF19Q9Y242 345 aa8.81□□□□□ -1
USP54-204ENST00000422491 WNT9BO14905 357 aa8.8□□□□□ -1
USP54-204ENST00000422491 MGST1P10620 155 aaKnown RBP8.8□□□□□ -1
USP54-204ENST00000422491 Q0VFX4 171 aa8.8□□□□□ -1
USP54-204ENST00000422491 IL11RAQ14626 422 aa8.8□□□□□ -1
USP54-204ENST00000422491 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
USP54-204ENST00000422491 DEFB125Q8N687 156 aa8.8□□□□□ -1
USP54-204ENST00000422491 MBD6Q96DN6 1003 aa8.8□□□□□ -1
USP54-204ENST00000422491 CSTL1Q9H114 145 aa8.8□□□□□ -1
USP54-204ENST00000422491 DOCK7Q96N67 2140 aa8.8□□□□□ -1
USP54-204ENST00000422491 OR2T8A6NH00 312 aa8.8□□□□□ -1
USP54-204ENST00000422491 CRXO43186 299 aaPredicted RBP8.8□□□□□ -1
USP54-204ENST00000422491 TFF1P04155 84 aa8.8□□□□□ -1
USP54-204ENST00000422491 GRPP07492 148 aa8.8□□□□□ -1
USP54-204ENST00000422491 CELA3BP08861 270 aa8.8□□□□□ -1
USP54-204ENST00000422491 RPL8P62917 257 aaKnown RBP8.8□□□□□ -1
USP54-204ENST00000422491 RAB31Q13636 194 aa8.8□□□□□ -1
USP54-204ENST00000422491 ALKBH6Q3KRA9 238 aa8.8□□□□□ -1
USP54-204ENST00000422491 FAM120AOSQ5T036 256 aa8.8□□□□□ -1
USP54-204ENST00000422491 TPRX1Q8N7U7 411 aa8.8□□□□□ -1
USP54-204ENST00000422491 RFESDQ8TAC1 157 aa8.8□□□□□ -1
USP54-204ENST00000422491 ST6GALNAC6Q969X2 333 aa8.8□□□□□ -1
USP54-204ENST00000422491 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
USP54-204ENST00000422491 ST20Q9HBF5 79 aa8.8□□□□□ -1
USP54-204ENST00000422491 FRYLO94915 3013 aa8.8□□□□□ -1
USP54-204ENST00000422491 OR2J3O76001 311 aa8.79□□□□□ -1
USP54-204ENST00000422491 CA7P43166 264 aa8.79□□□□□ -1
USP54-204ENST00000422491 ASPHD1Q5U4P2 390 aa8.79□□□□□ -1
USP54-204ENST00000422491 RNASEKQ6P5S7 137 aaKnown RBP8.79□□□□□ -1
USP54-204ENST00000422491 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
USP54-204ENST00000422491 SSBP3Q9BWW4 388 aaPredicted RBP8.79□□□□□ -1
USP54-204ENST00000422491 FSCN3Q9NQT6 498 aa8.79□□□□□ -1
USP54-204ENST00000422491 TMEM140Q9NV12 185 aa8.79□□□□□ -1
USP54-204ENST00000422491 OR4C46A6NHA9 309 aa8.79□□□□□ -1
USP54-204ENST00000422491 C21orf140B9A014 251 aa8.79□□□□□ -1
USP54-204ENST00000422491 C15orf65H3BRN8 121 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms