RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GPR31O00270 319 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 PTBP1P26599 531 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN4-202ENST00000420482 PLET1Q6UQ28 207 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 CADM3Q8N126 398 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 GDPD1Q8N9F7 314 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 VN1R17PQ8TDU5 208 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 EDA2RQ9HAV5 297 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 SCPEP1Q9HB40 452 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 FKBP11Q9NYL4 201 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 UFC1Q9Y3C8 167 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 APOA1P02647 267 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 OR13C7P0DN81 318 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 RPA2P15927 270 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 GPR183P32249 361 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 LPAR6P43657 344 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 OR1L6Q8NGR2 347 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 LSM10Q969L4 123 aaKnown RBP16.09■□□□□ 0.17
PTPN4-202ENST00000420482 TSC22D3Q99576 134 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 COMMD3Q9UBI1 195 aa16.09■□□□□ 0.17
PTPN4-202ENST00000420482 KRASP01116 189 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 SERPINE2P07093 398 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 CD7P09564 240 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 HLA-DMAP28067 261 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 HRH1P35367 487 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 ELLP55199 621 aaPredicted RBP16.08■□□□□ 0.16
PTPN4-202ENST00000420482 UXS1Q8NBZ7 420 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 IL17DQ8TAD2 202 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 ZNF502Q8TBZ5 544 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 WDR89Q96FK6 387 aaPredicted RBP16.08■□□□□ 0.16
PTPN4-202ENST00000420482 TMEM56Q96MV1 263 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 HINT2Q9BX68 163 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 SRD5A3Q9H8P0 318 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 PRNDQ9UKY0 176 aa16.08■□□□□ 0.16
PTPN4-202ENST00000420482 TEX50A0A1B0GTY4 177 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 TMEM213A2RRL7 107 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 SLC25A24Q6NUK1 477 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 RBPMS2Q6ZRY4 209 aaKnown RBP16.07■□□□□ 0.16
PTPN4-202ENST00000420482 DEFB125Q8N687 156 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 OR10W1Q8NGF6 305 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 OR52B4Q8NGK2 314 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 FCAMRQ8WWV6 532 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 CACNG8Q8WXS5 425 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 ATP6V0BQ99437 205 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 FAM212BQ9NTI7 297 aaPredicted RBP16.07■□□□□ 0.16
PTPN4-202ENST00000420482 MRPL27Q9P0M9 148 aaKnown RBP16.07■□□□□ 0.16
PTPN4-202ENST00000420482 LYSTQ99698 3801 aa16.07■□□□□ 0.16
PTPN4-202ENST00000420482 TRAV25A0A0B4J276 109 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 TGOLN2O43493 480 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 EIF4EP06730 217 aaKnown RBP16.06■□□□□ 0.16
PTPN4-202ENST00000420482 RCVRNP35243 200 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 ZFAND6Q6FIF0 208 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 LINC00322Q6ZN03 302 aaPredicted RBP16.06■□□□□ 0.16
PTPN4-202ENST00000420482 TMEM61Q8N0U2 210 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 OR5B3Q8NH48 314 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 GPX8Q8TED1 209 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 BSCL2Q96G97 398 aaPredicted RBP16.06■□□□□ 0.16
PTPN4-202ENST00000420482 FUNDC2Q9BWH2 189 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 FXYD6Q9H0Q3 95 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 NDUFA4L2Q9NRX3 87 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 OR51B2Q9Y5P1 312 aa16.06■□□□□ 0.16
PTPN4-202ENST00000420482 G6PCP35575 357 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 RORCP51449 518 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 MZT2AQ6P582 158 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 SPSB3Q6PJ21 355 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 LYSMD2Q8IV50 215 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 MLXQ9UH92 298 aa16.05■□□□□ 0.16
PTPN4-202ENST00000420482 F11RQ9Y624 299 aaKnown RBP16.05■□□□□ 0.16
PTPN4-202ENST00000420482 EDN2P20800 178 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 VBP1P61758 197 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 NCS1P62166 190 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 WT1-ASQ06250 92 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 ZNF585BQ52M93 769 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 TM4SF20Q53R12 229 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 BTNL8Q6UX41 500 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 SNX29P2Q8IUI4 249 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 SLC38A6Q8IZM9 456 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 AP3S1Q92572 193 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 GAR1Q9NY12 217 aaKnown RBP16.04■□□□□ 0.16
PTPN4-202ENST00000420482 CSMD3Q7Z407 3707 aa16.04■□□□□ 0.16
PTPN4-202ENST00000420482 SCAF4O95104 1147 aaKnown RBP16.03■□□□□ 0.16
PTPN4-202ENST00000420482 C8orf88P0DMB2 117 aa16.03■□□□□ 0.16
PTPN4-202ENST00000420482 PHLDA2Q53GA4 152 aa16.03■□□□□ 0.16
PTPN4-202ENST00000420482 UNQ9165/PRO28630Q6UXU0 137 aa16.03■□□□□ 0.16
PTPN4-202ENST00000420482 ZNF436Q9C0F3 470 aaPredicted RBP16.03■□□□□ 0.16
PTPN4-202ENST00000420482 C21orf62Q9NYP8 219 aa16.03■□□□□ 0.16
PTPN4-202ENST00000420482 RBMY1BA6NDE4 496 aaKnown RBP16.02■□□□□ 0.16
PTPN4-202ENST00000420482 RBMY1EA6NEQ0 496 aaKnown RBP16.02■□□□□ 0.16
PTPN4-202ENST00000420482 OR2T8A6NH00 312 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 RBMY1DP0C7P1 496 aaKnown RBP16.02■□□□□ 0.16
PTPN4-202ENST00000420482 UCP3P55916 312 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 LAMTOR1Q6IAA8 161 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 H2BFWTQ7Z2G1 175 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 TBC1D26Q86UD7 250 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 OR4A16Q8NH70 328 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 DAZ1Q9NQZ3 744 aaKnown RBP16.02■□□□□ 0.16
PTPN4-202ENST00000420482 NSG2Q9Y328 171 aa16.02■□□□□ 0.16
PTPN4-202ENST00000420482 DNAH1Q9P2D7 4330 aa16.02■□□□□ 0.15
PTPN4-202ENST00000420482 IGHV3-35A0A0C4DH35 117 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 LCE6AA0A183 80 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms