RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
PTCH1-205ENST00000418258 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTCH1-205ENST00000418258 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 KCNE5Q9UJ90 142 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-205ENST00000418258 FUT5Q11128 374 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 SAPCD1Q5SSQ6 148 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 STPG2Q8N412 459 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 Q96M66 194 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 NRIP2Q9BQI9 281 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 A0A0G2JMM0 328 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 A0A1W2PPB8 328 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 A0A1W2PRS3 328 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 KIR3DP1A8MWS1 328 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 SIGIRRQ6IA17 410 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 LINC00470Q9BZP3 86 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 GP6Q9HCN6 339 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 IGHV2OR16-5A0A0B4J2B6 119 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 IRF3Q14653 427 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 ZNF815PA8K554 130 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 C1QL1O75973 258 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 PKIAP61925 76 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 PRELID3AQ96N28 172 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 DMRTA2Q96SC8 542 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 CHCHD2Q9Y6H1 151 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-205ENST00000418258 KLK2P20151 261 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 C8orf82Q6P1X6 216 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-205ENST00000418258 PRSS22Q9GZN4 317 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 SH3BGRL3Q9H299 93 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 CBLN4Q9NTU7 201 aa9.51□□□□□ -0.89
PTCH1-205ENST00000418258 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 IGHV1-2P23083 117 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 TRBV5-5A0A0J9YX44 114 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 KLF4O43474 513 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 GZMMP51124 257 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 ROS1P08922 2347 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 P2RY4P51582 365 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 SMIM10L1P0DMW3 83 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM105Q8N8V8 129 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 SMIM10Q96HG1 83 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 FNDC1Q4ZHG4 1894 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-205ENST00000418258 C4orf51C9J302 202 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 NPIPB4C9JG80 1138 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 A0A1W2PR77 199 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 C8orf46Q8TAG6 207 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 C21orf62Q9NYP8 219 aa9.5□□□□□ -0.89
PTCH1-205ENST00000418258 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 PLA2G10O15496 165 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 MYOD1P15172 320 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 FOLR2P14207 255 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 COL4A5P29400 1685 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 ASPHD2Q6ICH7 369 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
PTCH1-205ENST00000418258 PARLQ9H300 379 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 RPRMQ9NS64 109 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 CELA3BP08861 270 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 AGAP20933 346 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 SPACA3Q8IXA5 215 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 MSGN1A6NI15 193 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 SRIP30626 198 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 EIF4EBP2Q13542 120 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-205ENST00000418258 ZNF79Q15937 498 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 BIVMQ86UB2 503 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 GAGE10A6NGK3 116 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 FAM216BQ8N7L0 139 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 TRAF4Q9BUZ4 470 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-205ENST00000418258 C5orf66Q9H5L9 145 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 G6PC2Q9NQR9 355 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
PTCH1-205ENST00000418258 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 CD300CQ08708 224 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 CENPWQ5EE01 88 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 TEX45Q8NA69 505 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 RARRES2Q99969 163 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 ALX4Q9H161 411 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-205ENST00000418258 ELF5Q9UKW6 265 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-205ENST00000418258 TSC2P49815 1807 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 HLA-DQB1P01920 261 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 DYSFO75923 2080 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 H3BRM9 83 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 TRGC2P03986 189 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 PRSS53Q2L4Q9 553 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 REC114Q7Z4M0 266 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 SLC25A28Q96A46 364 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 SPTAN1Q13813 2472 aaKnown RBP9.48□□□□□ -0.89
PTCH1-205ENST00000418258 H0YL77 283 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 SAMD13Q5VXD3 122 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms