RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 GNB4Q9HAV0 340 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 BATF3Q9NR55 127 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 SLC2A8Q9NY64 477 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 BET1LQ9NYM9 111 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 COMMD9Q9P000 198 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 TEX13DA0A0J9YY54 714 aaPredicted RBP13.79□□□□□ -0.2
VCP-202ENST00000417448 REG1AP05451 166 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 IL7P13232 177 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 SPNP16150 400 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 RPL27AP46776 148 aaKnown RBP13.79□□□□□ -0.2
VCP-202ENST00000417448 INSL3P51460 131 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 AP3S2P59780 193 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 OR2B8PP59922 312 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 ERVK-16P61578 105 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 RPL8P62917 257 aaKnown RBP13.79□□□□□ -0.2
VCP-202ENST00000417448 POU2AF1Q16633 256 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 CCDC71LQ8N9Z2 235 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 VSTM2AQ8TAG5 236 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
VCP-202ENST00000417448 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
VCP-202ENST00000417448 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
VCP-202ENST00000417448 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 TEX22C9J3V5 150 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 H0Y980 276 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 RBMXL2O75526 392 aaKnown RBP13.78□□□□□ -0.2
VCP-202ENST00000417448 IGHV3-11P01762 117 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 SERPINE2P07093 398 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 OR5AC1P0C628 307 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
VCP-202ENST00000417448 AKR1C4P17516 323 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 HLA-GP17693 338 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 FAUP35544 74 aaKnown RBP13.78□□□□□ -0.2
VCP-202ENST00000417448 ZNF45Q02386 682 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 SEC22AQ96IW7 307 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 NAA60Q9H7X0 242 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 COA4Q9NYJ1 87 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 PTTG2Q9NZH5 202 aa13.78□□□□□ -0.2
VCP-202ENST00000417448 TEX50A0A1B0GTY4 177 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 IGKV1-5P01602 117 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 TRGV3P03979 118 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 GP9P14770 177 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 AREGP15514 252 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 TPPP2P59282 170 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 TRIM16LQ309B1 348 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 TCTEX1D1Q8N7M0 179 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 OR10W1Q8NGF6 305 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 LHFPL5Q8TAF8 219 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
VCP-202ENST00000417448 A0A0G2JRQ6 117 aa13.76□□□□□ -0.21
VCP-202ENST00000417448 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
VCP-202ENST00000417448 SURF2Q15527 256 aaPredicted RBP13.76□□□□□ -0.21
VCP-202ENST00000417448 OR4A5Q8NH83 315 aa13.76□□□□□ -0.21
VCP-202ENST00000417448 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
VCP-202ENST00000417448 AIFM2Q9BRQ8 373 aa13.76□□□□□ -0.21
VCP-202ENST00000417448 PLA2G10O15496 165 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
VCP-202ENST00000417448 MAS1LP35410 378 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 ZNF429Q86V71 674 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 GLYATL2Q8WU03 294 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 FLVCR2Q9UPI3 526 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 OR51B2Q9Y5P1 312 aa13.75□□□□□ -0.21
VCP-202ENST00000417448 SNAPC5O75971 98 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 UCP1P25874 307 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 BTCP35070 178 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
VCP-202ENST00000417448 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
VCP-202ENST00000417448 COMMD5Q9GZQ3 224 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 TMEM222Q9H0R3 208 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 FAM212BQ9NTI7 297 aaPredicted RBP13.74□□□□□ -0.21
VCP-202ENST00000417448 RYR1P21817 5038 aa13.74□□□□□ -0.21
VCP-202ENST00000417448 KMT2AQ03164 3969 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 ANKRD34BA5PLL1 514 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 IGHV4-30-4P0DP06 118 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 SGPP2Q8IWX5 399 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 UBE2E2Q96LR5 201 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 SCGB3A2Q96PL1 93 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 QTRT1Q9BXR0 403 aaKnown RBP13.73□□□□□ -0.21
VCP-202ENST00000417448 S4R3C0 116 aa13.73□□□□□ -0.21
VCP-202ENST00000417448 I3L521 148 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 SAP30O75446 220 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 CD40LGP29965 261 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 AKR1C2P52895 323 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 TMEM187Q14656 261 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 TMEM268Q5VZI3 342 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 Q6ZRM9 215 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 S100ZQ8WXG8 99 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 HECTD4Q9Y4D8 3996 aa13.72□□□□□ -0.21
VCP-202ENST00000417448 A0A0B4J293 547 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 IGLC7A0M8Q6 106 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms