RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 ZNF846Q147U1 533 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 RBMS2Q15434 407 aaKnown RBP4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 LYZL2Q7Z4W2 148 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 C1QL4Q86Z23 238 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 FAM219AQ8IW50 185 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 MRPL41Q8IXM3 137 aaKnown RBP4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 CENPSQ8N2Z9 138 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 TTC9CQ8N5M4 171 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 SLC35G3Q8N808 338 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 OR4F17Q8NGA8 305 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 OR1L8Q8NGR8 309 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 OR4A16Q8NH70 328 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 S100ZQ8WXG8 99 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 GPR146Q96CH1 333 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 ANAPC16Q96DE5 110 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 GALNT14Q96FL9 552 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 SCGB3A2Q96PL1 93 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 OR4F4Q96R69 305 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 SPIN2AQ99865 258 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 SPIN2BQ9BPZ2 258 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 CCDC32Q9BV29 185 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 WDR12Q9GZL7 423 aaKnown RBP4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 FAM212BQ9NTI7 297 aaPredicted RBP4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 TMEM14BQ9NUH8 114 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 NUDT15Q9NV35 164 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 CACNG5Q9UF02 275 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 PRNDQ9UKY0 176 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 DMRT1Q9Y5R6 373 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
SLC8A1-210ENST00000417271 ANK2Q01484 3957 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 IGHV3-21A0A0B4J1V1 117 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 NPIPB5A8MRT5 1133 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 CENPXA8MT69 81 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 I3L521 148 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 CCL24O00175 119 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 NDUFB8O95169 186 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 SFT2D2O95562 160 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 HLA-AP01891 365 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 LGALS1P09382 135 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TRAPPC2P0DI81 140 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TRAPPC2BP0DI82 140 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 OR13C7P0DN81 318 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 IGLL1P15814 213 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 MECP2P51608 486 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 SLURP1P55000 103 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 MFAP2P55001 183 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 DHODHQ02127 395 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 ASAH1Q13510 395 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 EXOSC2Q13868 293 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TMEM128Q5BJH2 165 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 LINC00299Q6ZSB3 139 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 SLC25A42Q86VD7 318 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 LINC00482Q8N8I6 264 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 OR11H1Q8NG94 326 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 OR52B4Q8NGK2 314 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 DEDD2Q8WXF8 326 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 RRNAD1Q96FB5 475 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 UBE2E2Q96LR5 201 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TMEM56Q96MV1 263 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 FANCD2OSQ96PS1 177 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 P2RX4Q99571 388 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 SLC25A21Q9BQT8 299 aaPredicted RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 C7orf50Q9BRJ6 194 aaKnown RBP4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 AIFM2Q9BRQ8 373 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 C20orf85Q9H1P6 137 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 ZNF257Q9Y2Q1 563 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TMEM56-RWDD3S4R434 201 aa4.3□□□□□ -1.72
SLC8A1-210ENST00000417271 TNCP24821 2201 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 TRBV9A0A0B4J1U6 114 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 A0A0B4J2A0 478 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 C13orf42A0A1B0GVH6 325 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 C9orf170A2RU37 121 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 MFSD2BA6NFX1 497 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 MPTX1A8MV57 137 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 PPP5D1E7EU14 171 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 G3V4G9 280 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 H3BUA1 57 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 ADAP1O75689 374 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 B3GALNT1O75752 331 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 IFNA17P01571 189 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 IGHV3-48P01763 117 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 TCRBP04435 133 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 CRYGCP07315 174 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 HOXB5P09067 269 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 OR4E1P0C645 316 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 DEFA4P12838 97 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 CTRB1P17538 263 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 CD33P20138 364 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 SLC6A1P30531 599 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 MYCNOSP40205 109 aa4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 HSPE1P61604 102 aaKnown RBP4.29□□□□□ -1.72
SLC8A1-210ENST00000417271 PRCDQ00LT1 54 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms