RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ALMS1Q8TCU4 4167 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 INMT-MINDY4F8WBC2 141 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 H0Y980 276 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 NDUFA3O95167 84 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 OR4E1P0C645 316 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 RPA2P15927 270 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 LPAR6P43657 344 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 LGALS7P47929 136 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 RPS16P62249 146 aaKnown RBP9.87□□□□□ -0.83
LINC00339-202ENST00000416769 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
LINC00339-202ENST00000416769 CX3CL1P78423 397 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 LIN54Q6MZP7 749 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 OR4S2Q8NH73 311 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 OSR1Q8TAX0 266 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-202ENST00000416769 CLCC1Q96S66 551 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 AIFM2Q9BRQ8 373 aa9.87□□□□□ -0.83
LINC00339-202ENST00000416769 SFT2D2O95562 160 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 DHFRP00374 187 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 IGKV1-16P04430 117 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 IL5P05113 134 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 ANXA3P12429 323 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
LINC00339-202ENST00000416769 UCP1P25874 307 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM187Q14656 261 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 OXA1LQ15070 435 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 NPBQ8NG41 125 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 GLYATL2Q8WU03 294 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 TP53RKQ96S44 253 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM222Q9H0R3 208 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 PLEKHA2Q9HB19 425 aa9.86□□□□□ -0.83
LINC00339-202ENST00000416769 FOXA2Q9Y261 457 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-202ENST00000416769 C9orf170A2RU37 121 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 SHOXO15266 292 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 CDS2O95674 445 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 CRYZL1O95825 349 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 HRASP01112 189 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 SERPINE2P07093 398 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 OR5AC1P0C628 307 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 HAGHQ16775 308 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 SP6Q3SY56 376 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 CADM3Q8N126 398 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 ABHD5Q8WTS1 349 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
LINC00339-202ENST00000416769 COMMD9Q9P000 198 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM56-RWDD3S4R434 201 aa9.85□□□□□ -0.83
LINC00339-202ENST00000416769 PIGBOS1A0A0B4J2F0 54 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 SRRM4A7MD48 611 aaKnown RBP9.84□□□□□ -0.83
LINC00339-202ENST00000416769 RRHO14718 337 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 PRAF2O60831 178 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 NQO2P16083 231 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 VAMP1P23763 118 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-202ENST00000416769 TPPP2P59282 170 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 DHRS2Q13268 280 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 POU2AF1Q16633 256 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 LFNGQ8NES3 379 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 OR4C12Q96R67 309 aa9.84□□□□□ -0.83
LINC00339-202ENST00000416769 A0A0B4J2A0 478 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 ANKRD34BA5PLL1 514 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 ATG12O94817 140 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 S1PR2O95136 353 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SPDEFO95238 335 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 IGKV1-39P01597 117 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 IGLV2-23P01705 113 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
LINC00339-202ENST00000416769 IGKV1D-39P04432 117 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 HSPB1P04792 205 aaKnown RBP9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SRPXP78539 464 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-202ENST00000416769 PSG5Q15238 335 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 PPP1R27Q86WC6 154 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SELENOHQ8IZQ5 122 aaKnown RBP9.83□□□□□ -0.84
LINC00339-202ENST00000416769 LGI3Q8N145 548 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 LRTM2Q8N967 370 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 TEX45Q8NA69 505 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 RHOVQ96L33 236 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 HARBI1Q96MB7 349 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 GPN1Q9HCN4 374 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SHPKQ9UHJ6 478 aa9.83□□□□□ -0.84
LINC00339-202ENST00000416769 SNRPGP15A8MWD9 76 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
LINC00339-202ENST00000416769 CA2P00918 260 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 CRYGBP07316 175 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-202ENST00000416769 UBE2KP61086 200 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms