RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CYP2G1PQ6ZSU1 146 aa8.96□□□□□ -0.98
COL12A1-203ENST00000416123 PPP1R27Q86WC6 154 aa8.96□□□□□ -0.98
COL12A1-203ENST00000416123 DPM3Q9P2X0 92 aa8.96□□□□□ -0.98
COL12A1-203ENST00000416123 TFF3Q07654 80 aa8.96□□□□□ -0.98
COL12A1-203ENST00000416123 ARPC1AQ92747 370 aa8.96□□□□□ -0.98
COL12A1-203ENST00000416123 GVINP1Q7Z2Y8 2422 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 TGIF2-C20orf24A0A0A6YYL0 155 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 POC1AQ8NBT0 407 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 C1orf162Q8NEQ5 155 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 CACNA1BQ00975 2339 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 TRGC2P03986 189 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 ZNF660Q6AZW8 331 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 GPR82Q96P67 336 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 NPIPB13A6NJU9 1138 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 NPIPB4C9JG80 1138 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 ACAA1P09110 424 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 HTN3P15516 51 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 SRD5A1P18405 259 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 FAM159AQ6UWV7 190 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 MRPL18Q9H0U6 180 aaKnown RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 CACNA1GO43497 2377 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 MSGN1A6NI15 193 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 CIDEAO60543 219 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 IGHV1-18A0A0C4DH31 117 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 IQCF6A8MYZ5 107 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 EFEMP2O95967 443 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 IGFBP2P18065 325 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 LAIR2Q6ISS4 152 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 FGFBP3Q8TAT2 258 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 DENND4CQ5VZ89 1909 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 KBTBD11-OT1A0A1B0GTJ5 212 aa8.95□□□□□ -0.98
COL12A1-203ENST00000416123 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-203ENST00000416123 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
COL12A1-203ENST00000416123 WFIKKN1Q96NZ8 548 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 TM4SF5O14894 197 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 CFDP00746 253 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-203ENST00000416123 LYZL4Q96KX0 146 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 GP6Q9HCN6 339 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 MEOX2P50222 304 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 FAM209AQ5JX71 171 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 HSPB9Q9BQS6 159 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 CBLN4Q9NTU7 201 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 SHISA3A0PJX4 238 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 NPIPB6E9PJ23 425 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 NPIPB9F8W1W9 429 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 RPS11P62280 158 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL12A1-203ENST00000416123 NSUN5P1Q3KNT7 163 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 SMIM8Q96KF7 97 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 GTF3C1Q12789 2109 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 GATA2P23769 480 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-203ENST00000416123 STPG2Q8N412 459 aa8.94□□□□□ -0.98
COL12A1-203ENST00000416123 NPDC1Q9NQX5 325 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-203ENST00000416123 PSMB11A5LHX3 300 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 NPFFO15130 113 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 RAMP3O60896 148 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 ZP1P60852 638 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 MAP1LC3AQ9H492 121 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 PQLC2LA1A4F0 135 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 LINC00862A6NCI5 91 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 RBFOX2O43251 390 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 VDAC2P45880 294 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 ZFP30Q9Y2G7 519 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 SIAH2O43255 324 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 GNLYP22749 145 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 SPSB4Q96A44 273 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 CGAP01215 116 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 OR11H4Q8NGC9 324 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 AQP10Q96PS8 301 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 ELOVL1Q9BW60 279 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 FAM90A26D6RGX4 464 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 COMPP49747 757 aaPredicted RBP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 LHFPL4Q7Z7J7 247 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 DOPEY2Q9Y3R5 2298 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 M0R381 172 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 GALNT14Q96FL9 552 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 DUX3Q96PT4 197 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 SEMA5BQ9P283 1151 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 MRPS18CQ9Y3D5 142 aaKnown RBP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 RPL24P83731 157 aaKnown RBP8.93□□□□□ -0.98
COL12A1-203ENST00000416123 LINC00114Q6XXX2 140 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 NRIP2Q9BQI9 281 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 C2orf16Q68DN1 1984 aa8.93□□□□□ -0.98
COL12A1-203ENST00000416123 IGLV3-12A0A075B6K2 115 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 RND3P61587 244 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 CENPWQ5EE01 88 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 SAA2-SAA4A0A096LPE2 208 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 SAA2P0DJI9 122 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-203ENST00000416123 COX19Q49B96 90 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 WNT10AQ9GZT5 417 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 NUP210Q8TEM1 1887 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-203ENST00000416123 NTN3O00634 580 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-203ENST00000416123 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-203ENST00000416123 DNLZQ5SXM8 178 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
COL12A1-203ENST00000416123 TM2D1Q9BX74 207 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms