RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 REG1BP48304 166 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF136P52737 540 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 DEFA3P59666 94 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SNRPGP62308 76 aaKnown RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 PSPHP78330 225 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SLC35A2P78381 396 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PLCXD2Q0VAA5 305 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CLEC12AQ5QGZ9 265 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 C12orf73Q69YU5 71 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 LAIR2Q6ISS4 152 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PRNTQ86SH4 94 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CSNK1G2-AS1Q8NCQ2 148 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PLPP5Q8NEB5 264 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF420Q8TAQ5 688 aaPredicted RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF721Q8TF20 911 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ISOC1Q96CN7 298 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TMEM101Q96IK0 257 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 LINC00479Q96M42 142 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 C18orf15Q96N68 181 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CCL19Q99731 98 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TMED9Q9BVK6 235 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TBL1XR1Q9BZK7 514 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 DUSP21Q9H596 190 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF226Q9NYT6 803 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SLC7A11Q9UPY5 501 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ERGIC3Q9Y282 383 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PCNX3Q9H6A9 2034 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 MEGF8Q7Z7M0 2845 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 IGHV3OR16-10A0A075B7F0 116 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 A0A0J9YXV3 536 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 A0A1B0GWA3 101 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 IRGMA1A4Y4 181 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.84□□□□□ -2.12
MCF2-204ENST00000414978 C1QBP02746 253 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 CLPSP04118 112 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 IGKV3-11P04433 115 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 HMGN1P05114 100 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 HTR1AP08908 422 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 MYCNOSP40205 109 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 MAP2K4P45985 399 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 TMBIM6P55061 237 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 EMX1Q04741 257 aaPredicted RBP1.84□□□□□ -2.12
MCF2-204ENST00000414978 EBPQ15125 230 aaKnown RBP1.84□□□□□ -2.12
MCF2-204ENST00000414978 RSU1Q15404 277 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 PDZD11Q5EBL8 140 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 LCE5AQ5TCM9 118 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 XAF1Q6GPH4 301 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 RPL13AP3Q6NVV1 102 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 ZNF525Q8N782 197 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 PFN4Q8NHR9 129 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 ZNF563Q8TA94 476 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 RAB2BQ8WUD1 216 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 SMIM8Q96KF7 97 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 TSSK6Q9BXA6 273 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 GNB1LQ9BYB4 327 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 RPS10P5Q9NQ39 176 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 DNAJC27Q9NZQ0 273 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 DSCAMO60469 2012 aa1.84□□□□□ -2.12
MCF2-204ENST00000414978 SEC16AO15027 2179 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 PKDREJQ9NTG1 2253 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 COL12A1Q99715 3063 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 ZNF729A6NN14 1252 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 NDUFS5O43920 106 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MYL12AP19105 171 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SSTR5P35346 364 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 NMUP48645 174 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SKP2Q13309 424 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 C1DQ13901 141 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 YIF1BQ5BJH7 314 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 HIST2H3PS2Q5TEC6 136 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 CYB5R2Q6BCY4 276 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SMARCD3Q6STE5 483 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MDP1Q86V88 176 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 CLDN22Q8N7P3 220 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR5T1Q8NG75 326 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 NEIL3Q8TAT5 605 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 PTX4Q96A99 478 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 C12orf43Q96C57 262 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 PRSS27Q9BQR3 290 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR52D1Q9H346 318 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 FLNAP21333 2647 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 RIIAD1A6NNX1 92 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 ZNF705GA8MUZ8 300 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 CDC42EP2O14613 210 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MYL12BO14950 172 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 IFNGP01579 166 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SLC2A1P11166 492 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 PIPP12273 146 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 PRTN3P24158 256 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 TSPOP30536 169 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 PRSS3P35030 304 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 CTBP2P56545 445 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 TTC32Q5I0X7 151 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SYT6Q5T7P8 510 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 SSX8Q7RTT4 187 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR8D4Q8NGM9 314 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 KRTAP9-2Q9BYQ4 174 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 BAIAP2Q9UQB8 552 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms