RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ANKRD31Q8N7Z5 1873 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 FGF9P31371 208 aaPredicted RBP15.66■□□□□ 0.1
SHANK3-202ENST00000414786 TMEM252Q8N6L7 170 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 IGLV3-16A0A075B6K0 115 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 CCL3L1P16619 93 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 FAM27BQ5VT28 67 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 VKORC1Q9BQB6 163 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 DDA1Q9BW61 102 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 LSM4Q9Y4Z0 139 aaKnown RBP15.66■□□□□ 0.1
SHANK3-202ENST00000414786 RFPL3SP0C7P2 107 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 TMEM186Q96B77 213 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 CELA3BP08861 270 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 RALGAPA1Q6GYQ0 2036 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 PAPPA-AS1Q5QFB9 102 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 H1FOOQ8IZA3 346 aaPredicted RBP15.66■□□□□ 0.1
SHANK3-202ENST00000414786 HS3ST3B1Q9Y662 390 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 GALP22466 123 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 P2RY4P51582 365 aa15.66■□□□□ 0.1
SHANK3-202ENST00000414786 COX6A1P12074 109 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 FAM19A2Q8N3H0 131 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 C21orf62Q9NYP8 219 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 RICTORQ6R327 1708 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 GATA4P43694 442 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 FAM110DQ8TAY7 271 aaPredicted RBP15.65■□□□□ 0.1
SHANK3-202ENST00000414786 SURF2Q15527 256 aaPredicted RBP15.65■□□□□ 0.1
SHANK3-202ENST00000414786 PMCHL1Q16048 86 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 NRIP2Q9BQI9 281 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 DPM3Q9P2X0 92 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 C1QTNF12Q5T7M4 302 aa15.65■□□□□ 0.1
SHANK3-202ENST00000414786 SEPSECSQ9HD40 501 aaKnown RBP15.65■□□□□ 0.1
SHANK3-202ENST00000414786 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 AGAP20933 346 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 WDR34Q96EX3 536 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 CA11O75493 328 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 DOCK9Q9BZ29 2069 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 LILRA1O75019 489 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 TFF3Q07654 80 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 C12orf54Q6X4T0 127 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 DOCK10Q96BY6 2186 aa15.64■□□□□ 0.09
SHANK3-202ENST00000414786 SRSF4Q08170 494 aaKnown RBP15.64■□□□□ 0.09
SHANK3-202ENST00000414786 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 BRD3OSQ6XYD6 125 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 BHLHA9Q7RTU4 235 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 DTX2Q86UW9 622 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 TRGV1A0A0A0MS02 117 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 SAP25Q8TEE9 199 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 MTCL1Q9Y4B5 1905 aaKnown RBP15.63■□□□□ 0.09
SHANK3-202ENST00000414786 SLC25A28Q96A46 364 aa15.63■□□□□ 0.09
SHANK3-202ENST00000414786 DOCK5Q9H7D0 1870 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 PAX4O43316 350 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 GNLYP22749 145 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 MEF2BQ02080 365 aaPredicted RBP15.62■□□□□ 0.09
SHANK3-202ENST00000414786 A0A0G2JMM0 328 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 A0A1W2PPB8 328 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 A0A1W2PRS3 328 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 KIR3DP1A8MWS1 328 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 DEFB130BP0DP73 79 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 DEFB130AP0DP74 79 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 CTAG1AP78358 180 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 TMEM222Q9H0R3 208 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 SCO2A0A1W2PP80 73 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 C19orf24Q9BVV8 132 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 KLRD1Q13241 179 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 ACTL10Q5JWF8 245 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 TNFSF18Q9UNG2 199 aa15.62■□□□□ 0.09
SHANK3-202ENST00000414786 NBEAP1P0C6P0 100 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 AKAP11Q9UKA4 1901 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 ST20Q9HBF5 79 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 ELOVL5Q9NYP7 299 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 HLA-DQA1P01909 254 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 OR2K2Q8NGT1 345 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 TRAV14DV4A0A0A6YYC5 116 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 ZNF729A6NN14 1252 aaPredicted RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 IL6RP08887 468 aaPredicted RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 GCHFRP30047 84 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 IFI27P40305 119 aaPredicted RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 SSBP4Q9BWG4 385 aaPredicted RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 MIXL1Q9H2W2 232 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 SMIM6P0DI80 62 aa15.61■□□□□ 0.09
SHANK3-202ENST00000414786 RPL34P49207 117 aaKnown RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 SIRT4Q9Y6E7 314 aaPredicted RBP15.61■□□□□ 0.09
SHANK3-202ENST00000414786 F8WEM9 126 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 WDFY2Q96P53 400 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 CECR9P0C854 216 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 NDPQ00604 133 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 EGR4Q05215 589 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 ZNF146Q15072 292 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 FER1L6-AS1Q8NA97 138 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 TMEM249Q2WGJ8 235 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 ZNF474Q6S9Z5 364 aaPredicted RBP15.6■□□□□ 0.09
SHANK3-202ENST00000414786 C9orf62Q8N4C0 152 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 IFNL4K9M1U5 179 aa15.6■□□□□ 0.09
SHANK3-202ENST00000414786 TGFBR3LH3BV60 316 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 SRSF6Q13247 344 aaKnown RBP15.59■□□□□ 0.09
SHANK3-202ENST00000414786 LCNL1Q6ZST4 164 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 ZNF329Q86UD4 541 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 JPT1Q9UK76 154 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 TMEM155Q4W5P6 130 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 SLC25A2Q9BXI2 301 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms