RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SLC36A1Q7Z2H8 476 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 MBD3L1Q8WWY6 194 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 ACOT12Q8WYK0 555 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 CNBD2Q96M20 576 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 OR8D2Q9GZM6 311 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 CST9LQ9H4G1 147 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 FAM96AQ9H5X1 160 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 UBAP1Q9NZ09 502 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 NAT8Q9UHE5 227 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 LSM5Q9Y4Y9 91 aaKnown RBP0.84□□□□□ -2.27
ATG4C-204ENST00000414558 TIMM22Q9Y584 194 aa0.84□□□□□ -2.27
ATG4C-204ENST00000414558 EVC2Q86UK5 1308 aa0.84□□□□□ -2.28
ATG4C-204ENST00000414558 CCDC88CQ9P219 2028 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 TRBV6-5A0A0K0K1A5 114 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 TRBV10-2A0A0K0K1G8 114 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 IRGMA1A4Y4 181 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 SMIM23A6NLE4 172 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 KCNK1O00180 336 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 MRPS14O60783 128 aaKnown RBP0.83□□□□□ -2.28
ATG4C-204ENST00000414558 IGHV3-7P01780 117 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 PPBPP02775 128 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 CALB1P05937 261 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 SULT1A3P0DMM9 295 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 SULT1A4P0DMN0 295 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 NKX2-5P52952 324 aaPredicted RBP0.83□□□□□ -2.28
ATG4C-204ENST00000414558 RPL18Q07020 188 aaKnown RBP0.83□□□□□ -2.28
ATG4C-204ENST00000414558 PMAIP1Q13794 54 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 NNATQ16517 81 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 NDUFA5Q16718 116 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 Q1T7F1 81 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 ARHGAP11BQ3KRB8 267 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 FAM27BQ5VT28 67 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 C7orf65Q6ZTY9 151 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 DCXRQ7Z4W1 244 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 ZNF676Q8N7Q3 588 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 C8orf76Q96K31 380 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 Q96M85 177 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 MRPS26Q9BYN8 205 aaKnown RBP0.83□□□□□ -2.28
ATG4C-204ENST00000414558 EFCAB1Q9HAE3 211 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 PAQR5Q9NXK6 330 aaPredicted RBP0.83□□□□□ -2.28
ATG4C-204ENST00000414558 IL36BQ9NZH7 164 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 FUT9Q9Y231 359 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 SNAPC4Q5SXM2 1469 aa0.83□□□□□ -2.28
ATG4C-204ENST00000414558 PLB1Q6P1J6 1458 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 INMT-MINDY4F8WBC2 141 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 TRAPPC2LH3BP13 241 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 M0R036 132 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 SLC22A1O15245 554 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 IFNA5P01569 189 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 PRM2P04554 102 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 HIST1H1EP10412 219 aaKnown RBP0.82□□□□□ -2.28
ATG4C-204ENST00000414558 DEFA4P12838 97 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 HLA-DMBP28068 263 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 ZNF80P51504 273 aaPredicted RBP0.82□□□□□ -2.28
ATG4C-204ENST00000414558 TCL1AP56279 114 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 CCL20P78556 96 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 OR2F1Q13607 317 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 ELOBQ15370 118 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 MOGQ16653 247 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 IMPG1Q17R60 797 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 RGS21Q2M5E4 152 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 IBA57Q5T440 356 aaKnown RBP0.82□□□□□ -2.28
ATG4C-204ENST00000414558 SYPL2Q5VXT5 272 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 ALKAL1Q6UXT8 129 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 FP248Q71RG6 208 aaPredicted RBP0.82□□□□□ -2.28
ATG4C-204ENST00000414558 C9orf163Q8N9P6 203 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 SLC35B4Q969S0 331 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 OR52E6Q96RD3 313 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 UCK1Q9HA47 277 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 MED9Q9NWA0 146 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 GUCA1BQ9UMX6 200 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 V9GYY5 206 aaPredicted RBP0.82□□□□□ -2.28
ATG4C-204ENST00000414558 MYH11P35749 1972 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 MAST2Q6P0Q8 1798 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 ADCY9O60503 1353 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 RALGAPA2Q2PPJ7 1873 aa0.82□□□□□ -2.28
ATG4C-204ENST00000414558 RTTNQ86VV8 2226 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 CUL9Q8IWT3 2517 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 STRCQ7RTU9 1775 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 TRBV20OR9-2A0A075B6H5 130 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 A0A0J9YY10 115 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 A0A1B0GX78 115 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 FABP5P3A8MUU1 101 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 IBA57-AS1B1ANH7 110 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 EEF1E1-BLOC1S5C9J1V9 151 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 ORC5O43913 435 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 CRPP02741 224 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 RPSAP08865 295 aaKnown RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 METTL15P1P0C7V9 234 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 TRGC1P0CF51 173 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 CEBPGP53567 150 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 MRPS15P82914 257 aaKnown RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 GRK1Q15835 563 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 GUK1Q16774 197 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 RPS19BP1Q86WX3 136 aaKnown RBP0.81□□□□□ -2.28
ATG4C-204ENST00000414558 DHFR2Q86XF0 187 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 TMEM86BQ8N661 226 aa0.81□□□□□ -2.28
ATG4C-204ENST00000414558 OR8J2Q8NGG1 315 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms