RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 STEAP1BQ6NZ63 245 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 CLEC19AQ6UXS0 136 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 H2BFWTQ7Z2G1 175 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 CADM3Q8N126 398 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 CCDC71LQ8N9Z2 235 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 OR4A16Q8NH70 328 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 TERB2Q8NHR7 220 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 ZFAND1Q8TCF1 268 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 ISOC1Q96CN7 298 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 CXorf58Q96LI9 332 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 TMEM56Q96MV1 263 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 FANCD2OSQ96PS1 177 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 COPZ2Q9P299 210 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
RFFL-204ENST00000414419 IGLV11-55A0A075B6I3 123 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 TRBV7-1A0A0A6YYK4 115 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 CGB1A6NKQ9 187 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 PPP5D1E7EU14 171 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 H3BMQ9 156 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 ATG12O94817 140 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 CD74P04233 296 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
RFFL-204ENST00000414419 PI3P19957 117 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 SLC25A24Q6NUK1 477 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 LHFPL1Q86WI0 220 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 OR10W1Q8NGF6 305 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 OR5B3Q8NH48 314 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
RFFL-204ENST00000414419 S4R3C0 116 aa8.56□□□□□ -1.04
RFFL-204ENST00000414419 C3orf85A0A1B0GTC6 90 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 DISC1C4P0D8 188 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 CTDSPLO15194 276 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 OR2C1O95371 312 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 HLA-AP01891 365 aaKnown RBP8.55□□□□□ -1.04
RFFL-204ENST00000414419 CSN3P07498 182 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■■□ 21.1
RFFL-204ENST00000414419 RND3P61587 244 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 LCN12Q6JVE5 192 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 GDPD1Q8N9F7 314 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 OR4D10Q8NGI6 311 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 MRGPRFQ96AM1 343 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 SEC22AQ96IW7 307 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
RFFL-204ENST00000414419 RSL24D1Q9UHA3 163 aaKnown RBP8.55□□□□□ -1.04
RFFL-204ENST00000414419 C14orf166Q9Y224 244 aaKnown RBP8.55□□□□□ -1.04
RFFL-204ENST00000414419 ZNF320A2RRD8 509 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 FABP12A6NFH5 140 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 C15orf61A6NNL5 157 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 CLEC3BP05452 202 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 AKAIN1P0CW23 69 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 AKR1C2P52895 323 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 TRIM16LQ309B1 348 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 IL34Q6ZMJ4 242 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 Q8N402 240 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 OR1L6Q8NGR2 347 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 OR13C8Q8NGS7 320 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 MARCH1Q8TCQ1 289 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 DYNLRB2Q8TF09 96 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 CCDC140Q96MF4 163 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 SLIRPQ9GZT3 109 aaKnown RBP8.54□□□□□ -1.04
RFFL-204ENST00000414419 TMEM14BQ9NUH8 114 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 CEPT1Q9Y6K0 416 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
RFFL-204ENST00000414419 MFSD2BA6NFX1 497 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 LGALS9O00182 355 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 B3GALNT1O75752 331 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
RFFL-204ENST00000414419 TNFSF8P32971 234 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 S100A5P33763 92 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 WT1-ASQ06250 92 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 C11orf87Q6NUJ2 197 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 FAAP20Q6NZ36 180 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 PLET1Q6UQ28 207 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 GTSCR1Q86UQ5 136 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 SGPP2Q8IWX5 399 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 RNASE11Q8TAA1 199 aaKnown RBP8.53□□□□□ -1.04
RFFL-204ENST00000414419 VN1R17PQ8TDU5 208 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 ASCL2Q99929 193 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 PRRT1Q99946 306 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 PDCD10Q9BUL8 212 aa8.53□□□□□ -1.04
RFFL-204ENST00000414419 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
RFFL-204ENST00000414419 TEX13DA0A0J9YY54 714 aaPredicted RBP8.52□□□□□ -1.05
RFFL-204ENST00000414419 GSTZ1O43708 216 aaPredicted RBP8.52□□□□□ -1.05
RFFL-204ENST00000414419 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
RFFL-204ENST00000414419 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
RFFL-204ENST00000414419 GPR183P32249 361 aa8.52□□□□□ -1.05
RFFL-204ENST00000414419 HSPE1P61604 102 aaKnown RBP8.52□□□□□ -1.05
RFFL-204ENST00000414419 ERHP84090 104 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms