RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CLPSP04118 112 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 RPL29P47914 159 aaKnown RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 NABP1Q96AH0 204 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 ZFP30Q9Y2G7 519 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 SLC25A15Q9Y619 301 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 SAA2-SAA4A0A096LPE2 208 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 FAM181BA6NEQ2 426 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 J3QRE1 110 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 SAA2P0DJI9 122 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 GOLT1AQ6ZVE7 132 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 OR10S1Q8NGN2 331 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 SRSF12Q8WXF0 261 aaKnown RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 GAS1P54826 345 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 ZNF672Q499Z4 452 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-202ENST00000413872 TEX45Q8NA69 505 aa14.47□□□□□ -0.09
PHRF1-202ENST00000413872 NBEAP1P0C6P0 100 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 ZNF841Q6ZN19 808 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 COLCA1Q6ZS62 124 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 TCF24Q7RTU0 167 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 RTBDNQ9BSG5 229 aaPredicted RBP14.46□□□□□ -0.09
PHRF1-202ENST00000413872 MAP1LC3AQ9H492 121 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 FOXA2Q9Y261 457 aaPredicted RBP14.46□□□□□ -0.09
PHRF1-202ENST00000413872 CXorf65A6NEN9 183 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 FBLL1A6NHQ2 334 aaKnown RBP14.46□□□□□ -0.09
PHRF1-202ENST00000413872 SRSF7Q16629 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
PHRF1-202ENST00000413872 WFIKKN1Q96NZ8 548 aa14.46□□□□□ -0.09
PHRF1-202ENST00000413872 IGHV3-35A0A0C4DH35 117 aa14.46□□□□□ -0.1
PHRF1-202ENST00000413872 SRSF9Q13242 221 aaKnown RBP eCLIP14.46□□□□□ -0.1
PHRF1-202ENST00000413872 WDR25Q64LD2 544 aaPredicted RBP14.46□□□□□ -0.1
PHRF1-202ENST00000413872 PET117Q6UWS5 81 aa14.46□□□□□ -0.1
PHRF1-202ENST00000413872 PRO1933Q9H354 126 aa14.46□□□□□ -0.1
PHRF1-202ENST00000413872 TRAV24A0A0B4J272 114 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 GPR183P32249 361 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 MSGN1A6NI15 193 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 IGHV3-48P01763 117 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 SAA1P0DJI8 122 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-202ENST00000413872 GPR82Q96P67 336 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 TUBA4BQ9H853 241 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 NCMAPQ5T1S8 102 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 GLRX5Q86SX6 157 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 FGFBP3Q8TAT2 258 aa14.45□□□□□ -0.1
PHRF1-202ENST00000413872 VWA8A3KMH1 1905 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 VDAC2P45880 294 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-202ENST00000413872 NHLRC3Q5JS37 347 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 MIEN1Q9BRT3 115 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 WNT10AQ9GZT5 417 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 SH3BGRL3Q9H299 93 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 MGAMO43451 1857 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 FAM90A9PA6NNJ1 464 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 AMY1AP04745 511 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 OOSP1A8MZH6 123 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 FAM169BQ8N8A8 192 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 SLC25A28Q96A46 364 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 ZNF319Q9P2F9 582 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 GNLYP22749 145 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 ICAM4Q14773 271 aa14.44□□□□□ -0.1
PHRF1-202ENST00000413872 TRAV20A0A0B4J274 112 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 LOC389332A0A1B0GUA5 103 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 VENTXO95231 258 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 PSMB2P49721 201 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 PAPPA-AS1Q5QFB9 102 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 TRAV34A0A0B4J273 112 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 RRHO14718 337 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 TMEM144Q7Z5S9 345 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 TRBV9A0A0B4J1U6 114 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 AGAP20933 346 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 RPRMQ9NS64 109 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 C15orf61A6NNL5 157 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 K7ENP7 123 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 PVRIGQ6DKI7 326 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 PARLQ9H300 379 aa14.43□□□□□ -0.1
PHRF1-202ENST00000413872 A0A0G2JNJ9 132 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 FOXI3A8MTJ6 420 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 M0R3E3 92 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 ZCCHC24Q8N2G6 241 aaKnown RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 RCC1LQ96I51 464 aaKnown RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 Q9UFV3 132 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 F12P00748 615 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 IGFBP2P18065 325 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 BTF3P20290 206 aaKnown RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 CD69Q07108 199 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 SDHCQ99643 169 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 H7C1H1 209 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 CLEC19AQ6UXS0 136 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 RPUSD1Q9UJJ7 312 aaKnown RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 IGKV3-15P01624 115 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 MPZP25189 248 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 FOXG1P55316 489 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-202ENST00000413872 EFNB1P98172 346 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 ESPL1Q14674 2120 aa14.42□□□□□ -0.1
PHRF1-202ENST00000413872 PRR32B1ATL7 298 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 H3BTX0 84 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 SMIM6P0DI80 62 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 NAT1P18440 290 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 ZNF506Q5JVG8 444 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 OR52E5Q8NH55 327 aa14.41□□□□□ -0.1
PHRF1-202ENST00000413872 LYNX1G3V0Z9 82 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms