RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NHLH2Q02577 135 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 PLGLAQ15195 96 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 TNXAQ16473 311 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 C5orf64Q2M2E5 130 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 LRRC75BQ2VPJ9 315 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 C9orf139Q6ZV77 190 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 SLC51BQ86UW2 128 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 HAPLN4Q86UW8 402 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 TMEM217Q8N7C4 229 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 SLC24A4Q8NFF2 622 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 OR8H1Q8NGG4 311 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 OR5C1Q8NGR4 320 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 OR1L8Q8NGR8 309 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 STOML3Q8TAV4 291 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 ST8SIA2Q92186 375 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 HINT2Q9BX68 163 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 ZNF471Q9BX82 626 aaPredicted RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 SMIM3Q9BZL3 60 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 ENY2Q9NPA8 101 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 HEYLQ9NQ87 328 aaPredicted RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 CYTL1Q9NRR1 136 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 FAM96BQ9Y3D0 163 aa5.3□□□□□ -1.56
VPS41-204ENST00000413141 STRAPQ9Y3F4 350 aaKnown RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 SOX21Q9Y651 276 aaPredicted RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 TET2Q6N021 2002 aaPredicted RBP5.3□□□□□ -1.56
VPS41-204ENST00000413141 FLNAP21333 2647 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 MDFIC2A0A1B0GVS7 189 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 NCBP2LA6PVI3 153 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 PMS2P5A8MQ11 134 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 TEX22C9J3V5 150 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 H3BUX3 64 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 FCN1O00602 326 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 CD5LO43866 347 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 ACTL6BO94805 426 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 SCAF4O95104 1147 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 CFDP00746 253 aaPredicted RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 IFNA10P01566 189 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 OR8U8P0C7N1 319 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 TPT1P13693 172 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 NPY1RP25929 384 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 RPL27AP46776 148 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 HBG1P69891 147 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 HBG2P69892 147 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 RPP30P78346 268 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 WT1-ASQ06250 92 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 SLC38A11Q08AI6 406 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 ARL16Q0P5N6 197 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 EXOSC2Q13868 293 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 CLINT1Q14677 625 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 AANATQ16613 207 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 BSXQ3C1V8 233 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 RPL7L1Q6DKI1 246 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 OR8G2PQ6IF36 304 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 TEX261Q6UWH6 196 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 Q8N9W7 124 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 OR10W1Q8NGF6 305 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 OR1S2Q8NGQ3 325 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 NANPQ8TBE9 248 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 PIFOQ8TCI5 191 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 TMEM170AQ8WVE7 144 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 SRSF12Q8WXF0 261 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 ATP5SQ99766 215 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 WFDC1Q9HC57 220 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 C1RLQ9NZP8 487 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 ITGB1BP2Q9UKP3 347 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 PAIP2BQ9ULR5 123 aaKnown RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 U3KQ87 197 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
VPS41-204ENST00000413141 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
VPS41-204ENST00000413141 BORCS7-ASMTA0A0B4J1R7 106 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 IGLC7A0M8Q6 106 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 A6NDX4 124 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 PRSS46E5RG02 174 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 DFFBO76075 338 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 JTBO76095 146 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 HLA-DRB1P01911 266 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 RNASE2P10153 161 aaKnown RBP5.28□□□□□ -1.56
VPS41-204ENST00000413141 HTR2BP41595 481 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 NDPQ00604 133 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 ZNF266Q14584 549 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 DEFB112Q30KQ8 113 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 C2orf83Q53S99 150 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 ZNF767PQ75MW2 155 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 TMEM219Q86XT9 240 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 BAP18Q8IXM2 172 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
VPS41-204ENST00000413141 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
VPS41-204ENST00000413141 LILRB2Q8N423 598 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 TEX29Q8N6K0 151 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 C5orf56Q8N8D9 126 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 UBAC2Q8NBM4 344 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 ZNF114Q8NC26 417 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 ZNF680Q8NEM1 530 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 ARPC1AQ92747 370 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 PINX1Q96BK5 328 aaKnown RBP5.28□□□□□ -1.56
VPS41-204ENST00000413141 PHYHIPLQ96FC7 376 aa5.28□□□□□ -1.56
VPS41-204ENST00000413141 RBM14Q96PK6 669 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms