RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 EFNB3Q15768 340 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 OR5B3Q8NH48 314 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 CCL17Q92583 94 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 TEX50A0A1B0GTY4 177 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 NDUFB3O43676 98 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 MT-CO2P00403 227 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 FABP1P07148 127 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 CD99P14209 185 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 SRP14P37108 136 aaKnown RBP9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 C4orf17Q53FE4 359 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM106BQ9NUM4 274 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-202ENST00000412615 BOD1L1Q8NFC6 3051 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 ICE1Q9Y2F5 2266 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 CCL3L1P16619 93 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PRR20EP86478 221 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PRR20CP86479 221 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PRR20DP86480 221 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PRR20BP86481 221 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PRR20AP86496 221 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 LRRC10Q5BKY1 277 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 KCNIP4Q6PIL6 250 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 ASCL5Q7RTU5 278 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 RND1Q92730 232 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM204Q9BSN7 226 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 SEPSECSQ9HD40 501 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 IGFBP2P18065 325 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 GCHFRP30047 84 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 TBR1Q16650 682 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 OR5T1Q8NG75 326 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 MRPL20Q9BYC9 149 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 PLCE1Q9P212 2302 aa9.37□□□□□ -0.91
TRAFD1-202ENST00000412615 A0A1W2PPQ1 181 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 SOD3P08294 240 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 FAM3BP58499 235 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 RBPJQ06330 500 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 H1FXQ92522 213 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 WFIKKN1Q96NZ8 548 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 MIOXQ9UGB7 285 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 RIF1Q5UIP0 2472 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 TNFRSF13BO14836 293 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 GGCTO75223 188 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM177Q53S58 311 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 PCGF1Q9BSM1 259 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 LRFN3Q9BTN0 628 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 ELOVL1Q9BW60 279 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 COMMD5Q9GZQ3 224 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 DYNLRB1Q9NP97 96 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 SLC45A2Q9UMX9 530 aa9.36□□□□□ -0.91
TRAFD1-202ENST00000412615 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 ZFHX2Q9C0A1 2572 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 H0YJW9 148 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 FAM71F2Q6NXP2 309 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 C8orf31Q8N9H6 132 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 FLYWCH2Q96CP2 140 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 BTF3L4Q96K17 158 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 DERL1Q9BUN8 251 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 FCN3O75636 299 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 LINC00869P0C866 280 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 CHRNA7P36544 502 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 ERHP84090 104 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 FOXC1Q12948 553 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 CLEC12BQ2HXU8 276 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 LINC00311Q8N616 119 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 OR4P4Q8NGL7 312 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 IMMP2LQ96T52 175 aa9.35□□□□□ -0.91
TRAFD1-202ENST00000412615 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 RP1L1Q8IWN7 2480 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 K7ENP7 123 aa9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 USF1P22415 310 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 RPL8P62917 257 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-202ENST00000412615 LCN2P80188 198 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms