RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 SPINK9Q5DT21 86 aa12.4□□□□□ -0.42
AP001056.1-201ENST00000411956 LFNGQ8NES3 379 aa12.4□□□□□ -0.42
AP001056.1-201ENST00000411956 C2orf50Q96LR7 162 aa12.4□□□□□ -0.42
AP001056.1-201ENST00000411956 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
AP001056.1-201ENST00000411956 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
AP001056.1-201ENST00000411956 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 CFHR3Q02985 330 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 TNFRSF9Q07011 255 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 CXorf66Q5JRM2 361 aaPredicted RBP12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 UNQ5815/PRO19632Q6UWF5 114 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 OR11H7Q8NGC8 314 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 SRSF8Q9BRL6 282 aaKnown RBP12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 PLEKHA3Q9HB20 300 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 WSB1Q9Y6I7 421 aa12.39□□□□□ -0.43
AP001056.1-201ENST00000411956 A0A1W2PN81 502 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 FAM90A26D6RGX4 464 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 AREGP15514 252 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 CXCL3P19876 107 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 CHRNA7P36544 502 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 HOXA1P49639 335 aaPredicted RBP12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 H2BFSP57053 126 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 WT1-ASQ06250 92 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 RBKSQ9H477 322 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
AP001056.1-201ENST00000411956 TET2Q6N021 2002 aaPredicted RBP12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 CEBPZOSA8MTT3 80 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 REG1AP05451 166 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 NKX2-1P43699 371 aaPredicted RBP12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 ID3Q02535 119 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 C11orf87Q6NUJ2 197 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 HSD17B13Q7Z5P4 300 aaPredicted RBP12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 KLHDC1Q8N7A1 406 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 FAM110DQ8TAY7 271 aaPredicted RBP12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 TMEM68Q96MH6 324 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 RNF114Q9Y508 228 aa12.37□□□□□ -0.43
AP001056.1-201ENST00000411956 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 INS-IGF2F8WCM5 200 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 PSMB6P28072 239 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 PROK1P58294 105 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 IL15RAQ13261 267 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 C10orf99Q6UWK7 81 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 GON7Q9BXV9 100 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 NMES1Q9C002 83 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
AP001056.1-201ENST00000411956 hCG_2014768A0A024R1R8 64 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 SOX15O60248 233 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 FBXO24O75426 580 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 MED6O75586 246 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 CRYGCP07315 174 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 OR13C7P0DN81 318 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 CTRB1P17538 263 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 POLR2GP62487 172 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 SLC35B1P78383 322 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 SRSF4Q08170 494 aaKnown RBP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 FOXL1Q12952 345 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 CTRB2Q6GPI1 263 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 ZNF329Q86UD4 541 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 OR2C3Q8N628 320 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
AP001056.1-201ENST00000411956 A0A1B0GVG6 124 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 K7EPK0 472 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 WRBO00258 174 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 SYNGR2O43760 224 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 SSSCA1O60232 199 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 IAPPP10997 89 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 CENPVQ7Z7K6 275 aaPredicted RBP12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 ZNF114Q8NC26 417 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 ZNF436Q9C0F3 470 aaPredicted RBP12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 LSM5Q9Y4Y9 91 aaKnown RBP12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 NF1P21359 2839 aa12.34□□□□□ -0.43
AP001056.1-201ENST00000411956 HAX1O00165 279 aa12.33□□□□□ -0.44
AP001056.1-201ENST00000411956 IGLV1-40P01703 118 aa12.33□□□□□ -0.44
AP001056.1-201ENST00000411956 IGHG4P01861 327 aa12.33□□□□□ -0.44
AP001056.1-201ENST00000411956 S100A10P60903 97 aa12.33□□□□□ -0.44
AP001056.1-201ENST00000411956 ERHP84090 104 aaKnown RBP12.33□□□□□ -0.44
AP001056.1-201ENST00000411956 CYCSP99999 105 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms