RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 PRR20AP86496 221 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 FOXL1Q12952 345 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 IMMP2LQ96T52 175 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 SCO2A0A1W2PP80 73 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 IGKV1-16P04430 117 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 IL3RAP26951 378 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 GCHFRP30047 84 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 GNG10P50151 68 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 SELENOVP59797 346 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 FAM78BQ5VT40 261 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 KCNIP4Q6PIL6 250 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 SLC25A48Q6ZT89 311 aaKnown RBP13□□□□□ -0.33
HOXD3-202ENST00000410016 NEUROG1Q92886 237 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 OR51B2Q9Y5P1 312 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
HOXD3-202ENST00000410016 TM4SF5O14894 197 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 SFRP2Q96HF1 295 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 RPUSD1Q9UJJ7 312 aaKnown RBP12.99□□□□□ -0.33
HOXD3-202ENST00000410016 DVL1O14640 695 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 FOXH1O75593 365 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 LINC00869P0C866 280 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 GPX4P36969 197 aaPredicted RBP12.99□□□□□ -0.33
HOXD3-202ENST00000410016 RPL15P61313 204 aaKnown RBP12.99□□□□□ -0.33
HOXD3-202ENST00000410016 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
HOXD3-202ENST00000410016 ZNF257Q9Y2Q1 563 aa12.99□□□□□ -0.33
HOXD3-202ENST00000410016 BSNQ9UPA5 3926 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 TNCP24821 2201 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 FNDC10F2Z333 226 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 IGFBP2P18065 325 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 CCKARP32238 428 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 BPIFB3P59826 476 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 RHOBP62745 196 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 PRNDQ9UKY0 176 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 J3QR06 171 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 UPK2O00526 184 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 GZMBP10144 247 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 SVIPQ8NHG7 77 aa12.98□□□□□ -0.33
HOXD3-202ENST00000410016 PRCDQ00LT1 54 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 RAB31Q13636 194 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 NUP37Q8NFH4 326 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 SGMS2Q8NHU3 365 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 FAM57AQ8TBR7 257 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 TANC2Q9HCD6 1990 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 ZNF318Q5VUA4 2279 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 ZNF292O60281 2723 aa12.97□□□□□ -0.33
HOXD3-202ENST00000410016 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.33
HOXD3-202ENST00000410016 TNFSF4P23510 183 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 TAS2R60P59551 318 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 RPL31P62899 125 aaKnown RBP12.96□□□□□ -0.33
HOXD3-202ENST00000410016 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
HOXD3-202ENST00000410016 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 ELOVL5Q9NYP7 299 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 A0A0U1RQK1 487 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 ZNF320A2RRD8 509 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 RNF224P0DH78 156 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 DEFA6Q01524 100 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 TMEM30BQ3MIR4 351 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 TEX38Q6PEX7 206 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.33
HOXD3-202ENST00000410016 TEX50A0A1B0GTY4 177 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 CCL8P80075 99 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 OR4P4Q8NGL7 312 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 C11orf52Q96A22 123 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 CHODLQ9H9P2 273 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 LINC00312Q9Y6C7 94 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 RAI1Q7Z5J4 1906 aaPredicted RBP12.95□□□□□ -0.34
HOXD3-202ENST00000410016 hADV38S2A0JD32 116 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 FCN3O75636 299 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 MIR17HGQ75NE6 70 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 MAP1BP46821 2468 aaKnown RBP12.95□□□□□ -0.34
HOXD3-202ENST00000410016 AKAP13Q12802 2813 aa12.95□□□□□ -0.34
HOXD3-202ENST00000410016 DYSFO75923 2080 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 K7EN84 100 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 PAX1P15863 534 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 CNN1P51911 297 aaKnown RBP12.94□□□□□ -0.34
HOXD3-202ENST00000410016 PKIAP61925 76 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 RTL8BQ17RB0 113 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 ZNF833PQ6ZTB9 187 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 BTF3L4Q96K17 158 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 BET1LQ9NYM9 111 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 ATMQ13315 3056 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 CEP250Q9BV73 2442 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 MDFIC2A0A1B0GVS7 189 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 OR4A8P0C604 315 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 IRF2P14316 349 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 AREGP15514 252 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
HOXD3-202ENST00000410016 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms