RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 Q6ZS49 121 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 YPEL2Q96QA6 119 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 CRYBG3Q68DQ2 2970 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 LY6HO94772 140 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 ZNF16P17020 682 aaPredicted RBP11.78□□□□□ -0.52
MINDY4-202ENST00000409881 KRTAP10-9P60411 292 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 CCL17Q92583 94 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 NEIL1Q96FI4 390 aaPredicted RBP11.78□□□□□ -0.52
MINDY4-202ENST00000409881 IMMP2LQ96T52 175 aa11.78□□□□□ -0.52
MINDY4-202ENST00000409881 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
MINDY4-202ENST00000409881 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
MINDY4-202ENST00000409881 KIR2DS1A0A191URI9 304 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 SLC25A6P12236 298 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 S100GP29377 79 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 KIR2DS4P43632 304 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 KIR2DS1Q14954 304 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
MINDY4-202ENST00000409881 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 CENPEQ02224 2701 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 LYNX1G3V0Z9 82 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 WNT9BO14905 357 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 NXPH2O95156 264 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 LYNX1P0DP58 116 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.53
MINDY4-202ENST00000409881 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 C11orf42Q8N5U0 333 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.53
MINDY4-202ENST00000409881 RNF7Q9UBF6 113 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
MINDY4-202ENST00000409881 LRRC30A6NM36 301 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 NDUFS7O75251 213 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 Q8TCH9 128 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 DERL1Q9BUN8 251 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 VAMP8Q9BV40 100 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 OR2W1Q9Y3N9 320 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 C11orf94C9JXX5 98 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 OVOL3O00110 214 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 VENTXO95231 258 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 FAM201AQ5SY85 155 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 GCSAMQ8N6F7 178 aa11.76□□□□□ -0.53
MINDY4-202ENST00000409881 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 CTXN2P0C2S0 81 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 RAB7AP51149 207 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 LINC00310P59036 64 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 Q8IYB0 196 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 FAM58AQ8N1B3 248 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 ZNF114Q8NC26 417 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 SGMS2Q8NHU3 365 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 OR1A1Q9P1Q5 309 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 DYSFO75923 2080 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 SRRM5B3KS81 715 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 WNT2P09544 360 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 COL8A2P25067 703 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 TPPP2P59282 170 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 UBE2G2P60604 165 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 FGF12P61328 243 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 ERVK11-1P61568 191 aa11.75□□□□□ -0.53
MINDY4-202ENST00000409881 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
MINDY4-202ENST00000409881 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
MINDY4-202ENST00000409881 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 CFHR2P36980 270 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 GNB1P62873 340 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 COL5A1-AS1Q5SY13 56 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 RDH5Q92781 318 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
MINDY4-202ENST00000409881 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 TIMM9Q9Y5J7 89 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 SERF1AO75920 110 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 HNF1AP20823 631 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 ATP5G3P48201 142 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 EFNA4P52798 201 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
MINDY4-202ENST00000409881 FBN2P35556 2912 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 CELSR2Q9HCU4 2923 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 F2Z2F3 143 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.73□□□□□ -0.53
MINDY4-202ENST00000409881 NDUFB4O95168 129 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 LHBP01229 141 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms