RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.81
CHMP3-204ENST00000409727 TNCP24821 2201 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 C15orf62A8K5M9 175 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 RRHO14718 337 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 FBXO24O75426 580 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 JTBO76095 146 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 FAM106CPP0CH98 169 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 BRS3P32247 399 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 HTR2BP41595 481 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 STOML3Q8TAV4 291 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 RNF5Q99942 180 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 NDUFA4L2Q9NRX3 87 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
CHMP3-204ENST00000409727 HECTD1Q9ULT8 2610 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 CGB1A6NKQ9 187 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 OR8U8P0C7N1 319 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 HBG1P69891 147 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 HBG2P69892 147 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 THNSL2Q86YJ6 484 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 C22orf15Q8WYQ4 148 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 ATP5SQ99766 215 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 ITGB1BP2Q9UKP3 347 aa9.95□□□□□ -0.82
CHMP3-204ENST00000409727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.824e-7■■■■□ 26.6
CHMP3-204ENST00000409727 A0A1B0GW64 132 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 CA2P00918 260 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 IFNA4P05014 189 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 REG1AP05451 166 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 RPP30P78346 268 aaKnown RBP9.94□□□□□ -0.82
CHMP3-204ENST00000409727 SLC25A24Q6NUK1 477 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 OR10P1Q8NGE3 313 aa9.94□□□□□ -0.82
CHMP3-204ENST00000409727 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 J3QLI3 93 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 CNIH1O95406 144 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 NPY1RP25929 384 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
CHMP3-204ENST00000409727 EIF5AP63241 154 aaKnown RBP9.93□□□□□ -0.82
CHMP3-204ENST00000409727 ZNF266Q14584 549 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 NPBQ8NG41 125 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 TMEM170AQ8WVE7 144 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 SH3BGRL3Q9H299 93 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 RFNGQ9Y644 331 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 CELSR1Q9NYQ6 3014 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 PLXNB1O43157 2135 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 UBE2L5PA0A1B0GUS4 154 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 OR13C7P0DN81 318 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 SNCAP37840 140 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 COMPP49747 757 aaPredicted RBP9.93□□□□□ -0.82
CHMP3-204ENST00000409727 RUNX1Q01196 453 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 WT1-ASQ06250 92 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 ETV3LQ6ZN32 361 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 Q8N6K4 173 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 UBAC2Q8NBM4 344 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 FOXC2Q99958 501 aa9.93□□□□□ -0.82
CHMP3-204ENST00000409727 CCDC168Q8NDH2 2452 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 MDFIC2A0A1B0GVS7 189 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 DFFBO76075 338 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 NDUFA3O95167 84 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 IFNA5P01569 189 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 RAB11AP62491 216 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 ERHP84090 104 aaKnown RBP9.92□□□□□ -0.82
CHMP3-204ENST00000409727 EBI3Q14213 229 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 C5orf64Q2M2E5 130 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 SLC7A5P1Q8MH63 180 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 BCL6BQ8N143 479 aaPredicted RBP9.92□□□□□ -0.82
CHMP3-204ENST00000409727 PHYHIPLQ96FC7 376 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 SSX3Q99909 188 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 FAM103A1Q9BTL3 118 aaKnown RBP9.92□□□□□ -0.82
CHMP3-204ENST00000409727 SLC25A32Q9H2D1 315 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 PDZD2O15018 2839 aa9.92□□□□□ -0.82
CHMP3-204ENST00000409727 A0A1W2PN81 502 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SMCO3A2RU48 225 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 LY86O95711 162 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 AREGP15514 252 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 CHRNA7P36544 502 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 RAB14P61106 215 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SSBP2P81877 361 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-204ENST00000409727 TUSC1Q2TAM9 212 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 STPG2Q8N412 459 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SSMEM1Q8WWF3 244 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
CHMP3-204ENST00000409727 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-204ENST00000409727 FBP1P09467 338 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 MAS1LP35410 378 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 FXYD3Q14802 87 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 LY6EQ16553 131 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 SCGB1C1Q8TD33 95 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms