RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RNASE6Q93091 150 aaKnown RBP7.13□□□□□ -1.27
SCN9A-203ENST00000409672 AMELYQ99218 206 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 M0R143 59 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TXNDC17Q9BRA2 123 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 DPM3Q9P2X0 92 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 DENND4AQ7Z401 1863 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 NPIPB4C9JG80 1138 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 K7ERU9 68 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TRGC1P0CF51 173 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF383Q8NA42 475 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 Q96MF0 132 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 CTXND1A0A1B0GTU2 59 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 TMEM174Q8WUU8 243 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 PLCE1Q9P212 2302 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 LINC00862A6NCI5 91 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 NDPQ00604 133 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 TIMM23BQ5SRD1 257 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 FAM166AQ6J272 317 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 RNF133Q8WVZ7 376 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 PCNX2A6NKB5 2137 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 ADARB2-AS1A8MUL3 147 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 CFDP00746 253 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 HMGCLL1Q8TB92 370 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 CST9LQ9H4G1 147 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 CBLN4Q9NTU7 201 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 PEX7O00628 323 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 APCDD1LQ8NCL9 501 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 HELZP42694 1942 aaKnown RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 THBDP07204 575 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 FOXA3P55318 350 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 Q6ZT83 130 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 CD8AP01732 235 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 TYMSP04818 313 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 COL11A2P13942 1736 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 GPR146Q96CH1 333 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 PARP14Q460N5 1801 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 CXorf65A6NEN9 183 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 REC114Q7Z4M0 266 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 MRPL20Q9BYC9 149 aaKnown RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 PTPRFP10586 1907 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 INS-IGF2F8WCM5 200 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 INSP01308 110 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 TNFSF10P50591 281 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF506Q5JVG8 444 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 SP5Q6BEB4 398 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-203ENST00000409672 TEX45Q8NA69 505 aa7.12□□□□□ -1.27
SCN9A-203ENST00000409672 KLF4O43474 513 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-203ENST00000409672 ZIC4Q8N9L1 334 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 RPRMQ9NS64 109 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 CKS1BP61024 79 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 PILRAQ9UKJ1 303 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 DMKNQ6E0U4 476 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-203ENST00000409672 SCGB3A1Q96QR1 104 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 MRPL16Q9NX20 251 aaKnown RBP7.11□□□□□ -1.27
SCN9A-203ENST00000409672 ALX3O95076 343 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 MUC1P15941 1255 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-203ENST00000409672 VMO1Q7Z5L0 202 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 OR11H7Q8NGC8 314 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 TSC2P49815 1807 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 A0A087WX48 190 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 UMODP07911 640 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 Q0VFX4 171 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 CLPPQ16740 277 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-203ENST00000409672 TMEM186Q96B77 213 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 LHFPL6Q9Y693 200 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 OGG1O15527 345 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 LEPROTL1O95214 131 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 NGFRP08138 427 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 S100A7L2Q5SY68 101 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 PTPRDP23468 1912 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 DEFB130BP0DP73 79 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 DEFB130AP0DP74 79 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF818PQ6ZRF7 136 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 RTN4RL2Q86UN3 420 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 CYB5R1Q9UHQ9 305 aa7.11□□□□□ -1.27
SCN9A-203ENST00000409672 IGKV1D-42A0A075B6H8 117 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 GZMBP10144 247 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 UBE2V2Q15819 145 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 IFNL4K9M1U5 179 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 FXYD1O00168 92 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 CRHP06850 196 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 LINC00158P58513 81 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 CYP2G1PQ6ZSU1 146 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 GDF15Q99988 308 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 DLEC1Q9Y238 1755 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 COL22A1Q8NFW1 1626 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 TRAV14DV4A0A0A6YYC5 116 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 PLP1P60201 277 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 TICRRQ7Z2Z1 1910 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 IGHV2OR16-5A0A0B4J2B6 119 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 RBMY1BA6NDE4 496 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms