RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 FOXG1P55316 489 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-205ENST00000409455 ZNF146Q15072 292 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 SCCPDHQ8NBX0 429 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 MS4A5Q9H3V2 200 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
LIMS2-205ENST00000409455 GTF3C1Q12789 2109 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 SRIP30626 198 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 RHOBP62745 196 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 OR2D3Q8NGH3 330 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-205ENST00000409455 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 HBZP02008 142 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 ERVK11-1P61568 191 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 MORN2Q502X0 79 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 STUMQ69YW2 141 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 UNQ5815/PRO19632Q6UWF5 114 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 HSD17B10Q99714 261 aaKnown RBP12.79□□□□□ -0.36
LIMS2-205ENST00000409455 HEYLQ9NQ87 328 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-205ENST00000409455 HLA-DQA1P01909 254 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 PMCHL1Q16048 86 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-205ENST00000409455 MED12LQ86YW9 2145 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 TUSC5Q8IXB3 177 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 SSMEM1Q8WWF3 244 aa12.79□□□□□ -0.36
LIMS2-205ENST00000409455 TRGV5A0A0B4J1U4 118 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 LINC00473A8K010 186 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 KLK10O43240 276 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 HAND1O96004 215 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 AMY1AP04745 511 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 OR10J4P0C629 311 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 EFNB3Q15768 340 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 WDR86Q86TI4 376 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 NIT1Q86X76 327 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
LIMS2-205ENST00000409455 SPRR3Q9UBC9 169 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 CA2P00918 260 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 NTF3P20783 257 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 SLC35B1P78383 322 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 GCNT2Q8N0V5 402 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 ATOH7Q8N100 152 aa12.78□□□□□ -0.36
LIMS2-205ENST00000409455 HELTA6NFD8 242 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 BMPR1BO00238 502 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 WISP2O76076 250 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 NHLH1Q02575 133 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 PRAMEF5Q5TYX0 476 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 OR4C5Q8NGB2 326 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 MGAQ8IWI9 3026 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 IGHV2-26A0A0B4J1V2 119 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 PSPNO60542 156 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 AREGP15514 252 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-205ENST00000409455 TCL1AP56279 114 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 Q6ZVH6 145 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 LYG1Q8N1E2 194 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.37
LIMS2-205ENST00000409455 CDC42EP3Q9UKI2 254 aa12.77□□□□□ -0.37
LIMS2-205ENST00000409455 SPENQ96T58 3664 aaKnown RBP12.76□□□□□ -0.37
LIMS2-205ENST00000409455 CEACAM4O75871 244 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 TNFSF4P23510 183 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-205ENST00000409455 LINC00205P59089 165 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 FOXC1Q12948 553 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 FXYD3Q14802 87 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 TIGITQ495A1 244 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 FBLN7Q53RD9 439 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 PQLC2Q6ZP29 291 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 OR4P4Q8NGL7 312 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 BOD1L1Q8NFC6 3051 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 AARDQ4LEZ3 155 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 MRPL54Q6P161 138 aaKnown RBP12.76□□□□□ -0.37
LIMS2-205ENST00000409455 STPG3Q8N7X2 389 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
LIMS2-205ENST00000409455 LOC105371242A0A075B767 164 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 IGHV2-70DA0A0C4DH43 119 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 IGHV1-69-2A0A0G2JMI3 117 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 IGHV3-64DA0A0J9YX35 117 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 PRSS46E5RG02 174 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 FOXH1O75593 365 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 APCSP02743 223 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 GABRA2P47869 451 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 AESQ08117 197 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 SLC35E4Q6ICL7 350 aa12.75□□□□□ -0.37
LIMS2-205ENST00000409455 PNKDQ8N490 385 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms