RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PITPNC1Q9UKF7 332 aa13.36□□□□□ -0.27
SSB-202ENST00000409333 L7N2F9 121 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 PVALBP20472 110 aaPredicted RBP13.35□□□□□ -0.27
SSB-202ENST00000409333 VAMP2P63027 116 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 OR5R1Q8NH85 324 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
SSB-202ENST00000409333 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 RASL11BQ9BPW5 248 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 TNFSF18Q9UNG2 199 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 RNF222A6NCQ9 220 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 HMSDA8MTL9 139 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 HLA-DRB1P01911 266 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 VDAC2P45880 294 aaPredicted RBP13.35□□□□□ -0.27
SSB-202ENST00000409333 RPL27AP46776 148 aaKnown RBP13.35□□□□□ -0.27
SSB-202ENST00000409333 NDPQ00604 133 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 TMEM65Q6PI78 240 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 HSPB9Q9BQS6 159 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 VPREB3Q9UKI3 123 aa13.35□□□□□ -0.27
SSB-202ENST00000409333 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 INAFM1C9JVW0 142 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 FGF16O43320 207 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 CNIH1O95406 144 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 APELAP0DMC3 54 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 CX3CL1P78423 397 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 FXYD3Q14802 87 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 SMIM8Q96KF7 97 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 FAM103A1Q9BTL3 118 aaKnown RBP13.34□□□□□ -0.27
SSB-202ENST00000409333 HEYLQ9NQ87 328 aaPredicted RBP13.34□□□□□ -0.27
SSB-202ENST00000409333 LYRM2Q9NU23 88 aaPredicted RBP13.34□□□□□ -0.27
SSB-202ENST00000409333 PSENENQ9NZ42 101 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 WSB1Q9Y6I7 421 aa13.34□□□□□ -0.27
SSB-202ENST00000409333 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 HKR1P10072 659 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 SRD5A1P18405 259 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 CXCL2P19875 107 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 P2RY1P47900 373 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 CAV2P51636 162 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 AP2S1P53680 142 aaPredicted RBP13.33□□□□□ -0.28
SSB-202ENST00000409333 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 C9orf62Q8N4C0 152 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
SSB-202ENST00000409333 IGSF23A1L1A6 192 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 TEX22C9J3V5 150 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 RPL23AP62750 156 aaKnown RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 WT1-ASQ06250 92 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 SPANXN5Q5MJ07 72 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 C16orf82Q7Z2V1 217 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 ARPC1AQ92747 370 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 CIB3Q96Q77 187 aaPredicted RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 HIPK2Q9H2X6 1198 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 ENY2Q9NPA8 101 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 TAS2R30P59541 319 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 INO80EQ8NBZ0 244 aaPredicted RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 MFFQ9GZY8 342 aa13.32□□□□□ -0.28
SSB-202ENST00000409333 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
SSB-202ENST00000409333 IGLC7A0M8Q6 106 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 GPR137BO60478 399 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 TSC22D2O75157 780 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 REG1AP05451 166 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 AREGP15514 252 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 TMEM252Q8N6L7 170 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
SSB-202ENST00000409333 A0A1W2PN81 502 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 LINC01548A6NM66 108 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 OR13C7P0DN81 318 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 CHRNA7P36544 502 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 BLCAPP62952 87 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSB-202ENST00000409333 C9orf152Q5JTZ5 239 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
SSB-202ENST00000409333 ACOT7LQ6ZUV0 252 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 ABHD5Q8WTS1 349 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 TMEM170AQ8WVE7 144 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 BSCL2Q96G97 398 aaPredicted RBP13.3□□□□□ -0.28
SSB-202ENST00000409333 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
SSB-202ENST00000409333 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 HSPB11Q9Y547 144 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 DNAJC9-AS1A6NH13 148 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 M0QZK8 103 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 IFNA10P01566 189 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 METTL15P1P0C7V9 234 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
SSB-202ENST00000409333 NHLH2Q02577 135 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 ZNF345Q14585 488 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 Q6ZS46 218 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms