RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
PCDH20-201ENST00000409204 PRO1933Q9H354 126 aa10.2□□□□□ -0.78
PCDH20-201ENST00000409204 CKS2P33552 79 aa10.2□□□□□ -0.78
PCDH20-201ENST00000409204 CX3CL1P78423 397 aa10.2□□□□□ -0.78
PCDH20-201ENST00000409204 ZNF418Q8TF45 676 aaPredicted RBP10.2□□□□□ -0.78
PCDH20-201ENST00000409204 IGKV3D-15A0A087WSY6 115 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 GPX1P07203 203 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 TMEM177Q53S58 311 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 ZNF841Q6ZN19 808 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 DUX5Q96PT3 197 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 GGACTQ9BVM4 153 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IFI27L2Q9H2X8 130 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 TP53BP1Q12888 1972 aaPredicted RBP10.19□□□□□ -0.78
PCDH20-201ENST00000409204 H0YL77 283 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IGKV1D-33P01593 117 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IGKV1-33P01594 117 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IGHV3-48P01763 117 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 RNF224P0DH78 156 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 ANOS1P23352 680 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 ELOVL1Q9BW60 279 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 CDKN1AP38936 164 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IFT22Q9H7X7 185 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 FBLN5Q9UBX5 448 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 PCNTO95613 3336 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 GCGP01275 180 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 CD99P14209 185 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 TIMP3P35625 211 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 C2orf68Q2NKX9 166 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 NUP37Q8NFH4 326 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
PCDH20-201ENST00000409204 IGKV1-9A0A0C4DH69 117 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 C17orf98A8MV24 154 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 CD8AP01732 235 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 CRYBB3P26998 211 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 PSMB2P49721 201 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 MEOX2P50222 304 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 B3GALT5-AS1P59052 145 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 IL18BPO95998 194 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 MOSP00540 346 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 DANCRP0C864 163 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 SAPCD1Q5SSQ6 148 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 CYP2G1PQ6ZSU1 146 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 CLDND2Q8NHS1 167 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 C21orf62Q9NYP8 219 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 SIAH2O43255 324 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 DLX6P56179 175 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 GTF3AQ92664 365 aaKnown RBP10.18□□□□□ -0.78
PCDH20-201ENST00000409204 NABP1Q96AH0 204 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 GFI1Q99684 422 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 DCAF16Q9NXF7 216 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 PROB1E7EW31 1015 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 LY6DQ14210 128 aa10.18□□□□□ -0.78
PCDH20-201ENST00000409204 SRSF12Q8WXF0 261 aaKnown RBP10.18□□□□□ -0.78
PCDH20-201ENST00000409204 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 TDGF1P13385 188 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 CCL1P22362 96 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 GCHFRP30047 84 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 FAM53AQ6NSI3 398 aaPredicted RBP10.17□□□□□ -0.78
PCDH20-201ENST00000409204 OR4X2Q8NGF9 303 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 MIEN1Q9BRT3 115 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 MRPL20Q9BYC9 149 aaKnown RBP10.17□□□□□ -0.78
PCDH20-201ENST00000409204 M0R3E3 92 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
PCDH20-201ENST00000409204 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 CACNG8Q8WXS5 425 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 H3BTX0 84 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 CRXO43186 299 aaPredicted RBP10.17□□□□□ -0.78
PCDH20-201ENST00000409204 IGKV3-15P01624 115 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 ARPC1AQ92747 370 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 ZFP30Q9Y2G7 519 aa10.17□□□□□ -0.78
PCDH20-201ENST00000409204 YPEL1O60688 119 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 CCL3L1P16619 93 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
PCDH20-201ENST00000409204 WDR82Q6UXN9 313 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 YPEL2Q96QA6 119 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 RPRMQ9NS64 109 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 TRBV6-7A0A0A0MS04 114 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 GCSHP23434 173 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
PCDH20-201ENST00000409204 FOXF2Q12947 444 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 TBR1Q16650 682 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 PLPPR1Q8TBJ4 325 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 IGHV3OR16-13A0A075B7E8 117 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 IGHV3-74A0A0B4J1X5 117 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 C5orf52A6NGY3 159 aa10.16□□□□□ -0.78
PCDH20-201ENST00000409204 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms