RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 H3BRM9 83 aa10.96□□□□□ -0.65
RNF43-201ENST00000407977 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
RNF43-201ENST00000407977 ACP7Q6ZNF0 438 aa10.96□□□□□ -0.65
RNF43-201ENST00000407977 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
RNF43-201ENST00000407977 H3BTX0 84 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 TNFSF13O75888 250 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 MOSP00540 346 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 COX6A1P12074 109 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 TIMM23BQ5SRD1 257 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 BEND2Q8NDZ0 799 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 CHCHD1Q96BP2 118 aaKnown RBP10.96□□□□□ -0.66
RNF43-201ENST00000407977 C1QTNF5Q9BXJ0 243 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.66
RNF43-201ENST00000407977 ADMP35318 185 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 ID3Q02535 119 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 GDF15Q99988 308 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 NHSL1Q5SYE7 1610 aa10.96□□□□□ -0.66
RNF43-201ENST00000407977 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 PPBPP02775 128 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 SFTPCP11686 197 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 TFPI2P48307 235 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
RNF43-201ENST00000407977 PCOLCEQ15113 449 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 SIGMAR1Q99720 223 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 LOC101059948A0A1B0GTJ6 334 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 REG1AP05451 166 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 LINC00271P0C7V0 271 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 IL9P15248 144 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 ST6GALNAC6Q969X2 333 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 STARD6P59095 220 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 ST6GALNAC3Q8NDV1 305 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 TRAV1-1A0A0B4J248 108 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 NPFFO15130 113 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 H0YIZ8 118 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 UCNP55089 124 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 ORAOV1Q8WV07 137 aa10.95□□□□□ -0.66
RNF43-201ENST00000407977 GHRHP01286 108 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 LINC00614P0C842 121 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 SRSF3P84103 164 aaKnown RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 RPL39P5Q59GN2 51 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 Q6ZT83 130 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 ATP5L2Q7Z4Y8 100 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 REPIN1Q9BWE0 567 aaKnown RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 LEAP2Q969E1 77 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 CCL21O00585 134 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 HBDP02042 147 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 GLRXP35754 106 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 FAM74A4Q5TZK3 123 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 CLEC2AQ6UVW9 174 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 ZNF703Q9H7S9 590 aaPredicted RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 FAM90A9PA6NNJ1 464 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 NDUFS8O00217 210 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 CEACAM4O75871 244 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 TBX6O95947 436 aaPredicted RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 CCL1P22362 96 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 MESP2Q0VG99 397 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 SLC25A28Q96A46 364 aa10.94□□□□□ -0.66
RNF43-201ENST00000407977 NXT2Q9NPJ8 142 aaKnown RBP10.94□□□□□ -0.66
RNF43-201ENST00000407977 J3QRE1 110 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 SNAI2O43623 268 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 FOXL2P58012 376 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 HSD52Q0P140 79 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 ATXN7O15265 892 aaPredicted RBP10.93□□□□□ -0.66
RNF43-201ENST00000407977 RNASE1P07998 156 aaKnown RBP10.93□□□□□ -0.66
RNF43-201ENST00000407977 PLPPR1Q8TBJ4 325 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 SPSB2Q99619 263 aa10.93□□□□□ -0.66
RNF43-201ENST00000407977 PEAR1Q5VY43 1037 aaPredicted RBP10.93□□□□□ -0.66
RNF43-201ENST00000407977 C1orf162Q8NEQ5 155 aaPredicted RBP10.93□□□□□ -0.66
RNF43-201ENST00000407977 KBTBD11-OT1A0A1B0GTJ5 212 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 FOXL1Q12952 345 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 C1orf194Q5T5A4 169 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 OR13C6PQ8NH95 151 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 Q9H3A6 140 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 TNFRSF18Q9Y5U5 241 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 IGKV3D-15A0A087WSY6 115 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 APOMO95445 188 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 IGKV3-15P01624 115 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 C1QTNF9P0C862 333 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 GLRX5Q86SX6 157 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 OR9G4Q8NGQ1 327 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 ASCL2Q99929 193 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 PAX1P15863 534 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 NUTF2P61970 127 aaKnown RBP10.92□□□□□ -0.66
RNF43-201ENST00000407977 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 TRAV8-2A0A0B4J237 113 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms