RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 CRYBA1P05813 215 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 PPIAL4FP0DN26 164 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 CD1BP29016 333 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 CCL8P80075 99 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 FAM71F2Q6NXP2 309 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 CLEC2AQ6UVW9 174 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 LCN15Q6UWW0 184 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 DDB2Q92466 427 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 MALSU1Q96EH3 234 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 QTRT1Q9BXR0 403 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 CTDSP1Q9GZU7 261 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 PPIAL4AQ9Y536 164 aa10.54□□□□□ -0.72
SMARCB1-203ENST00000407082 DYSFO75923 2080 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 TMEM250H0YL14 139 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 NDUFB3O43676 98 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 APOA2P02652 100 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 GYPAP02724 150 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 TFF1P04155 84 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 ARG1P05089 322 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 S100A6P06703 90 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 NDUFB7P17568 137 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 EFNA4P52798 201 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 HSPE1P61604 102 aaKnown RBP10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 RELBQ01201 579 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 LRRC10Q5BKY1 277 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 SLC25A48Q6ZT89 311 aaKnown RBP10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 C8orf31Q8N9H6 132 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 HIST1H2BAQ96A08 127 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 CCL13Q99616 98 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 TMEM160Q9NX00 188 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 SLC25A10Q9UBX3 287 aaPredicted RBP10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 WDR83OSQ9Y284 106 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 ZNF257Q9Y2Q1 563 aa10.53□□□□□ -0.72
SMARCB1-203ENST00000407082 A0A1W2PPV4 95 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 ZFP92A6NM28 416 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 C15orf61A6NNL5 157 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 LY6HO94772 140 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 OPRK1P41145 380 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 CEBPGP53567 150 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 ELLP55199 621 aaPredicted RBP10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 LYG1Q8N1E2 194 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF439Q8NDP4 499 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 DEFB108BQ8NET1 73 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 NANPQ8TBE9 248 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 RAB1CQ92928 201 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 NPCDR1Q9BY65 106 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 NPVFQ9HCQ7 196 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 RFNGQ9Y644 331 aa10.52□□□□□ -0.73
SMARCB1-203ENST00000407082 DSCAML1Q8TD84 2053 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 SAA2-SAA4A0A096LPE2 208 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 MEX3AA1L020 520 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 PROP1O75360 226 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 SAA2P0DJI9 122 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 RAB5AP20339 215 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 MDKP21741 143 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 VDAC2P45880 294 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF134P52741 427 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 FAM120AOSQ5T036 256 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 OR4A5Q8NH83 315 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 RHOVQ96L33 236 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 SLC35D1Q9NTN3 355 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
SMARCB1-203ENST00000407082 A0A1W2PPH5 198 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 TMPRSS2O15393 492 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 MT-CO2P00403 227 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 HNF1AP20823 631 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 IL3RAP26951 378 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 DSCR9P59020 149 aa10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 RPL31P62899 125 aaKnown RBP10.5□□□□□ -0.73
SMARCB1-203ENST00000407082 MEF2BQ02080 365 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms