RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 OR5M8Q8NGP6 311 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 GRPEL2Q8TAA5 225 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 ABHD5Q8WTS1 349 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 C2orf50Q96LR7 162 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 ZNF436Q9C0F3 470 aaPredicted RBP6.6□□□□□ -1.35
GPC3-203ENST00000406757 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.6□□□□□ -1.35
GPC3-203ENST00000406757 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 C1RLQ9NZP8 487 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 PITPNC1Q9UKF7 332 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 FBXO7Q9Y3I1 522 aa6.6□□□□□ -1.35
GPC3-203ENST00000406757 LSM5Q9Y4Y9 91 aaKnown RBP6.6□□□□□ -1.35
GPC3-203ENST00000406757 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
GPC3-203ENST00000406757 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 A0A1B0GU03 582 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 MSGN1A6NI15 193 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 C15orf61A6NNL5 157 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 PITX3O75364 302 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 SPDEFO95238 335 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 IFNA17P01571 189 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 REG1AP05451 166 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
GPC3-203ENST00000406757 IAPPP10997 89 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 S100A10P60903 97 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 POLR2GP62487 172 aaKnown RBP eCLIP6.59□□□□□ -1.35
GPC3-203ENST00000406757 RPL8P62917 257 aaKnown RBP6.59□□□□□ -1.35
GPC3-203ENST00000406757 CX3CL1P78423 397 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 NDPQ00604 133 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 C19orf35Q6ZS72 473 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 MMD2Q8IY49 270 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 OR10W1Q8NGF6 305 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 OR8H1Q8NGG4 311 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 OR4D5Q8NGN0 318 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 OR4A5Q8NH83 315 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 RBKSQ9H477 322 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 RANGRFQ9HD47 186 aaPredicted RBP6.59□□□□□ -1.35
GPC3-203ENST00000406757 RCL1Q9Y2P8 373 aaKnown RBP6.59□□□□□ -1.35
GPC3-203ENST00000406757 WSB1Q9Y6I7 421 aa6.59□□□□□ -1.35
GPC3-203ENST00000406757 PLXNB1O43157 2135 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 CEBPZOSA8MTT3 80 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 G3V318 75 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 WRBO00258 174 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 CCNKO75909 580 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 ACTL6BO94805 426 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 EGR2P11161 476 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 MDKP21741 143 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 NKX2-1P43699 371 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 RPL27AP46776 148 aaKnown RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 HSPE1P61604 102 aaKnown RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 IL15RAQ13261 267 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 RAB32Q13637 225 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 SRSF12Q8WXF0 261 aaKnown RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 NOL4LQ96MY1 436 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 SPIN2AQ99865 258 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 SPIN2BQ9BPZ2 258 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 COMMD5Q9GZQ3 224 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 PARP11Q9NR21 331 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 TMEM14BQ9NUH8 114 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 PRNDQ9UKY0 176 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 FOXA2Q9Y261 457 aaPredicted RBP6.58□□□□□ -1.36
GPC3-203ENST00000406757 POMT1Q9Y6A1 747 aa6.58□□□□□ -1.36
GPC3-203ENST00000406757 TRAV14DV4A0A0A6YYC5 116 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 H0YIZ8 118 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 K7EPK0 472 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 FGF16O43320 207 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 SSSCA1O60232 199 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TRAPPC2P0DI81 140 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TRAPPC2BP0DI82 140 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 AREGP15514 252 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
GPC3-203ENST00000406757 ID3Q02535 119 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TNFRSF9Q07011 255 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 SRSF4Q08170 494 aaKnown RBP6.57□□□□□ -1.36
GPC3-203ENST00000406757 ECSCRQ19T08 205 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 HIST2H2BDQ6DRA6 164 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ZNF562Q6V9R5 426 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 Q6ZSV7 163 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 C16orf82Q7Z2V1 217 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TMEM86BQ8N661 226 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 LFNGQ8NES3 379 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 OR5T1Q8NG75 326 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 OR1L8Q8NGR8 309 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 PPP1R1CQ8WVI7 109 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ARPC1AQ92747 370 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 NMES1Q9C002 83 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 ZNF702PQ9H963 129 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 NDUFA4L2Q9NRX3 87 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
GPC3-203ENST00000406757 TGP01266 2768 aa6.56□□□□□ -1.36
GPC3-203ENST00000406757 H3BP45 60 aa6.56□□□□□ -1.36
GPC3-203ENST00000406757 CLDN34H7C241 214 aa6.56□□□□□ -1.36
GPC3-203ENST00000406757 SYNGR2O43760 224 aa6.56□□□□□ -1.36
GPC3-203ENST00000406757 TMEM50AO95807 157 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms