RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 LINC00527Q9UJ94 153 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 TMED3Q9Y3Q3 217 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OR51B2Q9Y5P1 312 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 A0A1W2PN81 502 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 INMT-MINDY4F8WBC2 141 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 CYB5BO43169 146 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 PRAF2O60831 178 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 IFNA17P01571 189 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 IGKV1-5P01602 117 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 ELANEP08246 267 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 OR9G9P0C7N8 305 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 TRAPPC2P0DI81 140 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 TRAPPC2BP0DI82 140 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 CHRNA7P36544 502 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.09
RPAIN-204ENST00000405578 OR2B8PP59922 312 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 FOXE3Q13461 319 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 RGS21Q2M5E4 152 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 ZNF329Q86UD4 541 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 ZNF429Q86V71 674 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 HINT2Q9BX68 163 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 TMEM14BQ9NUH8 114 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 ZNF257Q9Y2Q1 563 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 NSG2Q9Y328 171 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 DNAH9Q9NYC9 4486 aa8.27□□□□□ -1.09
RPAIN-204ENST00000405578 DNAH3Q8TD57 4116 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 A0A1B0GU03 582 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 TCRBV4S1A1TA0A5B7 111 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 G3V318 75 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 H3BUA1 57 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 IGHG4P01861 327 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 IL5P05113 134 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 PF4V1P10720 104 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 DEFA4P12838 97 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 HSPE1P61604 102 aaKnown RBP8.26□□□□□ -1.09
RPAIN-204ENST00000405578 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 ANKRD55Q3KP44 614 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 C10orf55Q5SWW7 151 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 LYZL2Q7Z4W2 148 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 MINDY2Q8NBR6 621 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 LHFPL5Q8TAF8 219 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 ZNF431Q8TF32 576 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-204ENST00000405578 MITD1Q8WV92 249 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 ENY2Q9NPA8 101 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 COA4Q9NYJ1 87 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 PRR13Q9NZ81 148 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 CACNG5Q9UF02 275 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 FBXO7Q9Y3I1 522 aa8.26□□□□□ -1.09
RPAIN-204ENST00000405578 A0A0B4J293 547 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 HOXB5P09067 269 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 P0C879 139 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-204ENST00000405578 SLC25A6P12236 298 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 PPIFP30405 207 aaKnown RBP8.25□□□□□ -1.09
RPAIN-204ENST00000405578 SSBP2P81877 361 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-204ENST00000405578 ERHP84090 104 aaKnown RBP8.25□□□□□ -1.09
RPAIN-204ENST00000405578 CFHR3Q02985 330 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 UXS1Q8NBZ7 420 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 OR5T1Q8NG75 326 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 OR52E5Q8NH55 327 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 OR1S1Q8NH92 325 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 GPR146Q96CH1 333 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 WWC2-AS2Q96NR7 200 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 MARVELD1Q9BSK0 173 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 PLEKHA3Q9HB20 300 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 NDUFA4L2Q9NRX3 87 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 ZFP57Q9NU63 452 aa8.25□□□□□ -1.09
RPAIN-204ENST00000405578 TSSC4Q9Y5U2 329 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-204ENST00000405578 EPPK1P58107 5090 aaKnown RBP8.24□□□□□ -1.09
RPAIN-204ENST00000405578 HMX3A6NHT5 357 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 NPIPB5A8MRT5 1133 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 TEX22C9J3V5 150 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 ST8SIA3O43173 380 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 APELAP0DMC3 54 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 OR13C7P0DN81 318 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 CD28P10747 220 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 PSMB6P28072 239 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 HOXA1P49639 335 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-204ENST00000405578 SPCS3P61009 180 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 IZUMO4Q1ZYL8 232 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 NMSQ5H8A3 153 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 C12orf45Q8N5I9 185 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-204ENST00000405578 TTC9CQ8N5M4 171 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 OR1L6Q8NGR2 347 aa8.24□□□□□ -1.09
RPAIN-204ENST00000405578 SEC22CQ9BRL7 303 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms