RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ANOS1P23352 680 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 ACP7Q6ZNF0 438 aa11.32□□□□□ -0.6
SNED1-205ENST00000405547 OTX1P32242 354 aaPredicted RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 CACNG8Q8WXS5 425 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 CCL1P22362 96 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 PLCE1Q9P212 2302 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 NCKAP5O14513 1909 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 IGHV3-72A0A0B4J1Y9 119 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 WNT9BO14905 357 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 IL6RP08887 468 aaPredicted RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 NPIPB3Q92617 1050 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 GTF3AQ92664 365 aaKnown RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 FAM131CQ96AQ9 280 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 KCNS1Q96KK3 526 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 MRPL13Q9BYD1 178 aaKnown RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 CTSSP25774 331 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 NDUFAF3Q9BU61 184 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 A1L4Q6 167 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 FAM53AQ6NSI3 398 aaPredicted RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 TGFBR3LH3BV60 316 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 CD5P06127 495 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 RNF224P0DH78 156 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 STARD6P59095 220 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
SNED1-205ENST00000405547 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
SNED1-205ENST00000405547 CGAP01215 116 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 ZIC3O60481 467 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 A0A1B0GUT8 65 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNED1-205ENST00000405547 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 LOXL3P58215 753 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
SNED1-205ENST00000405547 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 SSBP3Q9BWW4 388 aaPredicted RBP11.3□□□□□ -0.6
SNED1-205ENST00000405547 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 RRHO14718 337 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 TIAF1O95411 115 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 GLRXP35754 106 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
SNED1-205ENST00000405547 PROB1E7EW31 1015 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 CX3CL1P78423 397 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 SRSF3P84103 164 aaKnown RBP11.29□□□□□ -0.6
SNED1-205ENST00000405547 TFF3Q07654 80 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 RAXQ9Y2V3 346 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 KIF26AQ9ULI4 1882 aaPredicted RBP11.29□□□□□ -0.6
SNED1-205ENST00000405547 ARF6P62330 175 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 C14orf144Q96I85 54 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 PEX7O00628 323 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 REG1AP05451 166 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 MRPS18CQ9Y3D5 142 aaKnown RBP11.29□□□□□ -0.6
SNED1-205ENST00000405547 A0A1B0GW15 77 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 H0YIZ8 118 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 SLC17A3O00476 420 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 Q6AWC8 147 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 NIT1Q86X76 327 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 FMC1Q96HJ9 113 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 LYPD3O95274 346 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 TNFSF10P50591 281 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
SNED1-205ENST00000405547 A0A1W2PR77 199 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
SNED1-205ENST00000405547 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
SNED1-205ENST00000405547 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms