RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SPINK9Q5DT21 86 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 MMD2Q8IY49 270 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 TMEM217Q8N7C4 229 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 OR2T10Q8NGZ9 312 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 BSCL2Q96G97 398 aaPredicted RBP16.85■□□□□ 0.29
TPM1-208ENST00000404484 IGHV1-69DA0A0B4J2H0 117 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 J3QLI3 93 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 TGFAP01135 160 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 IGHV1-69P01742 117 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 BRS3P32247 399 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 F2RL1P55085 397 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 CLINT1Q14677 625 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 ATP5SQ99766 215 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 C7orf69Q9H7B7 122 aa16.85■□□□□ 0.29
TPM1-208ENST00000404484 TEX50A0A1B0GTY4 177 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 ACTL6BO94805 426 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 HTR2BP41595 481 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 ATP5IP56385 69 aaPredicted RBP16.84■□□□□ 0.29
TPM1-208ENST00000404484 MRPL41Q8IXM3 137 aaKnown RBP16.84■□□□□ 0.29
TPM1-208ENST00000404484 PINX1Q96BK5 328 aaKnown RBP16.84■□□□□ 0.29
TPM1-208ENST00000404484 RBMXL1Q96E39 390 aaKnown RBP16.84■□□□□ 0.29
TPM1-208ENST00000404484 OR4C12Q96R67 309 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 HINT2Q9BX68 163 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 ZNF430Q9H8G1 570 aaPredicted RBP16.84■□□□□ 0.29
TPM1-208ENST00000404484 WFDC1Q9HC57 220 aa16.84■□□□□ 0.29
TPM1-208ENST00000404484 A0A1W2PN81 502 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 IFNA10P01566 189 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 IGKV1D-33P01593 117 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 IGKV1-33P01594 117 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 CRYGBP07316 175 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 CHRNA7P36544 502 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 RAB11AP62491 216 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 ATP6V1FQ16864 119 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 LILRB2Q8N423 598 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 RITA1Q96K30 269 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 ARV1Q9H2C2 271 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 KIAA1456Q9P272 454 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 METTL1Q9UBP6 276 aaKnown RBP16.83■□□□□ 0.28
TPM1-208ENST00000404484 SIGLEC9Q9Y336 463 aa16.83■□□□□ 0.28
TPM1-208ENST00000404484 CRLF1O75462 422 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 OR8U8P0C7N1 319 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 HES1Q14469 280 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 PRSS8Q16651 343 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 CLLU1Q5K131 121 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 OR10P1Q8NGE3 313 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 EAF1Q96JC9 268 aaPredicted RBP16.82■□□□□ 0.28
TPM1-208ENST00000404484 NDUFA4L2Q9NRX3 87 aa16.82■□□□□ 0.28
TPM1-208ENST00000404484 TRAV40A0A0B4J280 105 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 INS-IGF2F8WCM5 200 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 RRHO14718 337 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 NBR2O15453 112 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 IFNA5P01569 189 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 SNRNP70P08621 437 aaKnown RBP16.81■□□□□ 0.28
TPM1-208ENST00000404484 FAM106CPP0CH98 169 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 SLC38A11Q08AI6 406 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 EBI3Q14213 229 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 MMDQ15546 238 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 PPP1R27Q86WC6 154 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 DYNAPQ8N1N2 210 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 NPBQ8NG41 125 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 LRRC20Q8TCA0 184 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 GINS3Q9BRX5 216 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 SLC25A32Q9H2D1 315 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 TET2Q6N021 2002 aaPredicted RBP16.81■□□□□ 0.28
TPM1-208ENST00000404484 C15orf62A8K5M9 175 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 PLGLAQ15195 96 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 OR8G2PQ6IF36 304 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 THNSL2Q86YJ6 484 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 SLC24A4Q8NFF2 622 aa16.81■□□□□ 0.28
TPM1-208ENST00000404484 NDUFA3O95167 84 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 NPY1RP25929 384 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 CNTFRP26992 372 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 ERHP84090 104 aaKnown RBP16.8■□□□□ 0.28
TPM1-208ENST00000404484 SLC25A24Q6NUK1 477 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 HAPLN4Q86UW8 402 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 C17orf50Q8WW18 174 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 AJUBAQ96IF1 538 aa16.8■□□□□ 0.28
TPM1-208ENST00000404484 SEC11BP0C7V7 166 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 MYOD1P15172 320 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 ARL16Q0P5N6 197 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 TMED6Q8WW62 240 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 GNPNAT1Q96EK6 184 aaPredicted RBP16.79■□□□□ 0.28
TPM1-208ENST00000404484 TMEM147Q9BVK8 224 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 TPSG1Q9NRR2 321 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 TMEM160Q9NX00 188 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 TNCP24821 2201 aa16.79■□□□□ 0.28
TPM1-208ENST00000404484 PMS2P5A8MQ11 134 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 OPN1MWP04001 364 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 OPN1MW2P0DN77 364 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 OPN1MW3P0DN78 364 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 TMEM11P17152 192 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 RPL27AP46776 148 aaKnown RBP16.78■□□□□ 0.28
TPM1-208ENST00000404484 HNF4GQ14541 408 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 SCGB1C1Q8TD33 95 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 GGACTQ9BVM4 153 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 PARD6GQ9BYG4 376 aaPredicted RBP16.78■□□□□ 0.28
TPM1-208ENST00000404484 FBXL15Q9H469 300 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 C1RLQ9NZP8 487 aa16.78■□□□□ 0.28
TPM1-208ENST00000404484 RPS10-NUDT3A0A1W2PQS6 291 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms