RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TMEM267Q0VDI3 215 aaPredicted RBP26.15■■□□□ 1.78
CSNK1E-204ENST00000403904 C19orf24Q9BVV8 132 aa26.15■■□□□ 1.78
CSNK1E-204ENST00000403904 SIX6O95475 246 aa26.14■■□□□ 1.78
CSNK1E-204ENST00000403904 AKIRIN2Q53H80 203 aa26.14■■□□□ 1.78
CSNK1E-204ENST00000403904 WNT10AQ9GZT5 417 aa26.14■■□□□ 1.78
CSNK1E-204ENST00000403904 GSKIPQ9P0R6 139 aa26.14■■□□□ 1.78
CSNK1E-204ENST00000403904 ZNF580Q9UK33 172 aa26.14■■□□□ 1.78
CSNK1E-204ENST00000403904 PRCDQ00LT1 54 aa26.13■■□□□ 1.77
CSNK1E-204ENST00000403904 FOXL1Q12952 345 aa26.13■■□□□ 1.77
CSNK1E-204ENST00000403904 CXorf66Q5JRM2 361 aaPredicted RBP26.13■■□□□ 1.77
CSNK1E-204ENST00000403904 GSG1LQ6UXU4 331 aa26.13■■□□□ 1.77
CSNK1E-204ENST00000403904 ZNF329Q86UD4 541 aa26.13■■□□□ 1.77
CSNK1E-204ENST00000403904 TMEM89A2RUT3 159 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 HAX1O00165 279 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 AREGP15514 252 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 SPCS3P61009 180 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 C19orf54Q5BKX5 351 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 CENPVQ7Z7K6 275 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 OR5M8Q8NGP6 311 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 OR52E5Q8NH55 327 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 MED28Q9H204 178 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 MGAT4CQ9UBM8 478 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 IGLC7A0M8Q6 106 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 C10orf99Q6UWK7 81 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 Q6ZNX1 250 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 ZBTB8BQ8NAP8 495 aaPredicted RBP26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 TMEM158Q8WZ71 300 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 HSPB7Q9UBY9 170 aa26.12■■□□□ 1.77
CSNK1E-204ENST00000403904 TNFRSF9Q07011 255 aa26.11■■□□□ 1.77
CSNK1E-204ENST00000403904 KLHDC1Q8N7A1 406 aa26.11■■□□□ 1.77
CSNK1E-204ENST00000403904 OR5T1Q8NG75 326 aa26.11■■□□□ 1.77
CSNK1E-204ENST00000403904 OR4D5Q8NGN0 318 aa26.11■■□□□ 1.77
CSNK1E-204ENST00000403904 A0A1W2PN81 502 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 REG1AP05451 166 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 PPIFP30405 207 aaKnown RBP26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 CHRNA7P36544 502 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 PROK1P58294 105 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 WT1-ASQ06250 92 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 C2orf50Q96LR7 162 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 GON7Q9BXV9 100 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 PLEKHA3Q9HB20 300 aa26.1■■□□□ 1.77
CSNK1E-204ENST00000403904 A0A1B0GUS0 222 aa26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 PSMB11A5LHX3 300 aa26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 RIPPLY3P57055 190 aa26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 CFHR3Q02985 330 aa26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 PDLIM3Q53GG5 364 aaPredicted RBP26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 TMEM68Q96MH6 324 aa26.09■■□□□ 1.77
CSNK1E-204ENST00000403904 OR13C7P0DN81 318 aa26.08■■□□□ 1.77
CSNK1E-204ENST00000403904 H2BFSP57053 126 aa26.08■■□□□ 1.77
CSNK1E-204ENST00000403904 FCN2Q15485 313 aa26.08■■□□□ 1.77
CSNK1E-204ENST00000403904 SRSF8Q9BRL6 282 aaKnown RBP26.08■■□□□ 1.77
CSNK1E-204ENST00000403904 CACFD1Q9UGQ2 172 aa26.08■■□□□ 1.77
CSNK1E-204ENST00000403904 CEBPZOSA8MTT3 80 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 SOX15O60248 233 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 CXCL3P19876 107 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 HOXA1P49639 335 aaPredicted RBP26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 C19orf35Q6ZS72 473 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 MAGT1Q9H0U3 335 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 RBKSQ9H477 322 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 SCGB1D2O95969 90 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 RRAS2P62070 204 aaPredicted RBP26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 SLC35B1P78383 322 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 AWAT1Q58HT5 328 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 TTC9CQ8N5M4 171 aa26.07■■□□□ 1.76
CSNK1E-204ENST00000403904 FAM90A26D6RGX4 464 aa26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 NKX2-1P43699 371 aaPredicted RBP26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 ID3Q02535 119 aa26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 HSD17B13Q7Z5P4 300 aaPredicted RBP26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 OR11H7Q8NGC8 314 aa26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 ENY2Q9NPA8 101 aa26.06■■□□□ 1.76
CSNK1E-204ENST00000403904 PSMB6P28072 239 aa26.05■■□□□ 1.76
CSNK1E-204ENST00000403904 C11orf87Q6NUJ2 197 aa26.05■■□□□ 1.76
CSNK1E-204ENST00000403904 OR5AU1Q8NGC0 362 aa26.05■■□□□ 1.76
CSNK1E-204ENST00000403904 FAM110DQ8TAY7 271 aaPredicted RBP26.05■■□□□ 1.76
CSNK1E-204ENST00000403904 WIPF2Q8TF74 440 aaPredicted RBP26.05■■□□□ 1.76
CSNK1E-204ENST00000403904 TENM1Q9UKZ4 2725 aa26.04■■□□□ 1.76
CSNK1E-204ENST00000403904 WDR89Q96FK6 387 aaPredicted RBP26.04■■□□□ 1.76
CSNK1E-204ENST00000403904 NPIPB5A8MRT5 1133 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 CTRB1P17538 263 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 CTRB2Q6GPI1 263 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 DTD1Q8TEA8 209 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 FBXO24O75426 580 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 IGLV1-40P01703 118 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 IGHG4P01861 327 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 MBPP02686 304 aaPredicted RBP26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 PRH1P02810 166 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 CRYGCP07315 174 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 POLR2GP62487 172 aaKnown RBP eCLIP26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 ERHP84090 104 aaKnown RBP26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 MRPL41Q8IXM3 137 aaKnown RBP26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 OR2C3Q8N628 320 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 HEYLQ9NQ87 328 aaPredicted RBP26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 ZNF355PQ9NSJ1 428 aa26.03■■□□□ 1.76
CSNK1E-204ENST00000403904 COL6A5A8TX70 2615 aa26.02■■□□□ 1.76
CSNK1E-204ENST00000403904 SYNGR2O43760 224 aa26.02■■□□□ 1.76
CSNK1E-204ENST00000403904 IL15RAQ13261 267 aa26.02■■□□□ 1.76
CSNK1E-204ENST00000403904 TEX38Q6PEX7 206 aa26.02■■□□□ 1.76
CSNK1E-204ENST00000403904 INS-IGF2F8WCM5 200 aa26.01■■□□□ 1.75
CSNK1E-204ENST00000403904 MED6O75586 246 aa26.01■■□□□ 1.75
CSNK1E-204ENST00000403904 LCNL1Q6ZST4 164 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms