RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 CST9LP1Q5W188 147 aa13.81□□□□□ -0.2
DNMT3A-205ENST00000402667 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
DNMT3A-205ENST00000402667 OSR1Q8TAX0 266 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-205ENST00000402667 ABHD5Q8WTS1 349 aa13.81□□□□□ -0.2
DNMT3A-205ENST00000402667 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
DNMT3A-205ENST00000402667 ARFGEF3Q5TH69 2177 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 TRBV24-1A0A075B6N3 115 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 H0YJW9 148 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 DVL1O14640 695 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 APOA2P02652 100 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 S100A9P06702 114 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 ATP5G3P48201 142 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 S100A12P80511 92 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 SPNS3Q6ZMD2 512 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 OR5AN1Q8NGI8 311 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 OR51G1Q8NGK1 321 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 FKBP11Q9NYL4 201 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 REG1BP48304 166 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 STPG3Q8N7X2 389 aa13.8□□□□□ -0.2
DNMT3A-205ENST00000402667 FNDC10F2Z333 226 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 PDE6DO43924 150 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 CXorf1O96002 111 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 IGFBP2P18065 325 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 GNB1P62873 340 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 RAB31Q13636 194 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HARBI1Q96MB7 349 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 DOK5Q9P104 306 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BKO60814 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BJP06899 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 PFN1P07737 140 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HOXA5P20719 270 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BOP23527 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 APOBEC3AP31941 199 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BBP33778 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 NDUFA6P56556 154 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BDP58876 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BCP62807 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 EFNB3Q15768 340 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST2H2BEQ16778 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 OR5B3Q8NH48 314 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BHQ93079 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BNQ99877 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 HIST1H2BMQ99879 126 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 KAAG1Q9UBP8 84 aa13.79□□□□□ -0.2
DNMT3A-205ENST00000402667 KALRNO60229 2985 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 DIAPH2-AS1Q14236 149 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 TMEM177Q53S58 311 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 H7BYZ3 331 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 CLN5O75503 358 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 VENTXO95231 258 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 CD3EP07766 207 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 DLX6P56179 175 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 PRR20EP86478 221 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 PRR20CP86479 221 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 PRR20DP86480 221 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 PRR20BP86481 221 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 PRR20AP86496 221 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 SPATA31B1PQ5VZV4 182 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 LINC00311Q8N616 119 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 ZNF596Q8TC21 504 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 FLYWCH2Q96CP2 140 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 TCEAL7Q9BRU2 100 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 MSRB2Q9Y3D2 182 aa13.78□□□□□ -0.2
DNMT3A-205ENST00000402667 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 TGOLN2O43493 480 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 NDUFB4O95168 129 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 CHRNB4P30926 498 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 C2orf83Q53S99 150 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 MOB3BQ86TA1 216 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 C8orf31Q8N9H6 132 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 NECAP1Q8NC96 275 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 OR10W1Q8NGF6 305 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 TMEM186Q96B77 213 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
DNMT3A-205ENST00000402667 B9A039 149 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 PLAUP00749 431 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 LINC00869P0C866 280 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 COL8A2P25067 703 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 ATP5IP56385 69 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 RHOBP62745 196 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 FRZBQ92765 325 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 ST6GALNAC6Q969X2 333 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 NIT2Q9NQR4 276 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 F6UZH7 168 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 GALR1P47211 349 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 TMEM155Q4W5P6 130 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 FAM71F2Q6NXP2 309 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 LINC01560Q8TB33 94 aa13.76□□□□□ -0.21
DNMT3A-205ENST00000402667 ANAPC16Q96DE5 110 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms