RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 WNT16Q9UBV4 365 aa8.43□□□□□ -1.06
PTPRM-203ENST00000400060 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM50AO95807 157 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 CFHR5Q9BXR6 569 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 TRAV5A0A0B4J249 113 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 LOC101059948A0A1B0GTJ6 334 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 DLL1O00548 723 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 EDDM3AQ14507 147 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 RND1Q92730 232 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 ETV2O00321 342 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-203ENST00000400060 LCN12Q6JVE5 192 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 OR10X1Q8NGY0 326 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-203ENST00000400060 ZNF355PQ9NSJ1 428 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 CACNA1CQ13936 2221 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 OTOFQ9HC10 1997 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 A0A087WV48 116 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 hDV102S1A0JD36 115 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 TSPAN13O95857 204 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 GUSBP1Q15486 140 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 Q8NFD4 153 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 RASL10BQ96S79 203 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
PTPRM-203ENST00000400060 ZNF716A6NP11 495 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 SLAQ13239 276 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM95Q3KNT9 176 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 BHLHA15Q7RTS1 189 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 C1QL2Q7Z5L3 287 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE12JA6NER3 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 NKX2-8O15522 239 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE7O76087 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 LCTP09848 1927 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE12FP0CL80 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE12GP0CL81 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE12IP0CL82 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 ACP1P24666 158 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 GAGE4Q13068 117 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 BRWD3Q6RI45 1802 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 C5orf24Q7Z6I8 188 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 SNRNP40Q96DI7 357 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 HARBI1Q96MB7 349 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 PILRBQ9UKJ0 227 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 CRYBA4P53673 196 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 DLX1P56177 255 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 HSPE1P61604 102 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 SRSF6Q13247 344 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 BCL6BQ8N143 479 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM54Q969K7 222 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 C1RLQ9NZP8 487 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 LMO7DNF2Z398 122 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 CGAP01215 116 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 RPL8P62917 257 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 DRAM1Q8N682 238 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 ZNF721Q8TF20 911 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 ARPC1AQ92747 370 aa8.41□□□□□ -1.06
PTPRM-203ENST00000400060 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
PTPRM-203ENST00000400060 FCN3O75636 299 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 DPM2O94777 84 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 FHL1Q13642 323 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 TMEM30BQ3MIR4 351 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 SSBP3Q9BWW4 388 aaPredicted RBP8.4□□□□□ -1.06
PTPRM-203ENST00000400060 LOC389332A0A1B0GUA5 103 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 IFNL4K9M1U5 179 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 CD46P15529 392 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 GFERP55789 205 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 OR5AN1Q8NGI8 311 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 PHF7Q9BWX1 381 aaPredicted RBP8.4□□□□□ -1.06
PTPRM-203ENST00000400060 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 IGHV3-20A0A0C4DH32 117 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 RPL7P18124 248 aaKnown RBP8.4□□□□□ -1.06
PTPRM-203ENST00000400060 CD33P20138 364 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 CYB561P49447 251 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
PTPRM-203ENST00000400060 IGKV1D-8A0A087WSZ0 117 aa8.4□□□□□ -1.07
PTPRM-203ENST00000400060 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.07
PTPRM-203ENST00000400060 SNAI2O43623 268 aa8.4□□□□□ -1.07
PTPRM-203ENST00000400060 FOXA3P55318 350 aaPredicted RBP8.4□□□□□ -1.07
PTPRM-203ENST00000400060 GPR82Q96P67 336 aa8.4□□□□□ -1.07
PTPRM-203ENST00000400060 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.07
PTPRM-203ENST00000400060 HRKO00198 91 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 SIT1Q9Y3P8 196 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 A0A1W2PQM1 296 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 FNDC10F2Z333 226 aa8.39□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF726P1Q15940 193 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms