RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 INS-IGF2F8WCM5 200 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 CTRB1P17538 263 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 PSMB6P28072 239 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 MECP2P51608 486 aaKnown RBP13.76□□□□□ -0.21
CTNS-203ENST00000399306 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
CTNS-203ENST00000399306 CTRB2Q6GPI1 263 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 FYTTD1Q96QD9 318 aaKnown RBP13.76□□□□□ -0.21
CTNS-203ENST00000399306 KLK15Q9H2R5 256 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 COA4Q9NYJ1 87 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 VWFP04275 2813 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 A0A0B4J293 547 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 FAM240BA0A1B0GVZ2 78 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 IGLC7A0M8Q6 106 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 RAB25P57735 213 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 DEFA1P59665 94 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 DEFA3P59666 94 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 PPP1R1AQ13522 171 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 NSUN5P1Q3KNT7 163 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
CTNS-203ENST00000399306 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 FAM209BQ5JX69 171 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 OR5T1Q8NG75 326 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 OR52E5Q8NH55 327 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
CTNS-203ENST00000399306 C20orf85Q9H1P6 137 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 CMYA5Q8N3K9 4069 aa13.75□□□□□ -0.21
CTNS-203ENST00000399306 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 FAM223BA6NKX1 122 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 CYB5BO43169 146 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 TRGV3P03979 118 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 OR4E1P0C645 316 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
CTNS-203ENST00000399306 VAMP1P23763 118 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 IFITM3Q01628 133 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 FAM223AQ8IWN6 122 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 SLC35G3Q8N808 338 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 DUSP18Q8NEJ0 188 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 OR1L6Q8NGR2 347 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
CTNS-203ENST00000399306 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
CTNS-203ENST00000399306 I3L521 148 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 DUS4LO95620 317 aaKnown RBP13.73□□□□□ -0.21
CTNS-203ENST00000399306 SLC25A6P12236 298 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 MYOD1P15172 320 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 MYCNOSP40205 109 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 TPPP2P59282 170 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 LYG2Q86SG7 212 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 NECAP1Q8NC96 275 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 KLHL30-AS1Q8NEE0 82 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 PDCD10Q9BUL8 212 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 FLVCR2Q9UPI3 526 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 PKD1L1Q8TDX9 2849 aa13.73□□□□□ -0.21
CTNS-203ENST00000399306 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 A0A0G2JRQ6 117 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 A0A1B0GU03 582 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 DBX1A6NMT0 343 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 NUDT19A8MXV4 375 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 RBMXL2O75526 392 aaKnown RBP13.72□□□□□ -0.21
CTNS-203ENST00000399306 TSPAN15O95858 294 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
CTNS-203ENST00000399306 AREGP15514 252 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 DHRS2Q13268 280 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 ANKRD55Q3KP44 614 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
CTNS-203ENST00000399306 A0A1W2PRX2 142 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 ST8SIA3O43173 380 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
CTNS-203ENST00000399306 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 SPCS3P61009 180 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 WT1-ASQ06250 92 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 TREML4Q6UXN2 200 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 Q6ZRM9 215 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 LYZL2Q7Z4W2 148 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 ZNF114Q8NC26 417 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 COQ8AQ8NI60 647 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 ENKURQ8TC29 256 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 PALMDQ9NP74 551 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 NUDT15Q9NV35 164 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 THYN1Q9P016 225 aa13.71□□□□□ -0.21
CTNS-203ENST00000399306 IGLV11-55A0A075B6I3 123 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 C13orf42A0A1B0GVH6 325 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 H2AFB2P0C5Z0 115 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 APELAP0DMC3 54 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 OR13C7P0DN81 318 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
CTNS-203ENST00000399306 FHL3Q13643 280 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 SMCO1Q147U7 214 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 IZUMO4Q1ZYL8 232 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 C4orf46Q504U0 113 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 C8orf86Q6ZUL3 223 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms