RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 MIXL1Q9H2W2 232 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 NDUFA4L2Q9NRX3 87 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 THYN1Q9P016 225 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 SNAPC5O75971 98 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 OR2C1O95371 312 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 IFNA6P05013 189 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 SERPINE2P07093 398 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 RND3P61587 244 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 SSBP1Q04837 148 aaKnown RBP11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 WT1-ASQ06250 92 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 SPCS2Q15005 226 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 SBSPONQ8IVN8 264 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
SMIM11A-203ENST00000399299 C2orf70A6NJV1 201 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 C15orf61A6NNL5 157 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 A8MWP6 167 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 CD3DP04234 171 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 TMBIM6P55061 237 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 CLVS1Q8IUQ0 354 aaPredicted RBP11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 LAX1Q8IWV1 398 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 SEC22AQ96IW7 307 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 S4R3C0 116 aa11.27□□□□□ -0.61
SMIM11A-203ENST00000399299 GABARAPH6UMI1 98 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 RGS5O15539 181 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 CD74P04233 296 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 TMEM56Q96MV1 263 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 ZC4H2Q9NQZ6 224 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 NSG2Q9Y328 171 aa11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
SMIM11A-203ENST00000399299 IZUMO1RA6ND01 250 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 CTDSP2O14595 271 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 CLEC3BP05452 202 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 FOLR2P14207 255 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 TAS2R19P59542 299 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 CD300EQ496F6 205 aaPredicted RBP11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 DYNC2LI1Q8TCX1 351 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 HUWE1Q7Z6Z7 4374 aaKnown RBP11.25□□□□□ -0.61
SMIM11A-203ENST00000399299 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 DBX1A6NMT0 343 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 RAB3DO95716 219 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 PGAM2P15259 253 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 GPR183P32249 361 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 RPL5P46777 297 aaKnown RBP11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 PIGPP57054 158 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 STEAP1BQ6NZ63 245 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 TERB2Q8NHR7 220 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 SMIM4Q8WVI0 70 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
SMIM11A-203ENST00000399299 CTDSPLO15194 276 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 TGOLN2O43493 480 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 CBLN1P23435 193 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 MFAP2P55001 183 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 MEF2DQ14814 521 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 SLC25A24Q6NUK1 477 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 PLET1Q6UQ28 207 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 ZFAND1Q8TCF1 268 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 BSCL2Q96G97 398 aaPredicted RBP11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 PALMDQ9NP74 551 aa11.23□□□□□ -0.61
SMIM11A-203ENST00000399299 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms