RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TFF3Q07654 80 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 MBNL2Q5VZF2 373 aaKnown RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 RAB9AP51151 201 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 PEAR1Q5VY43 1037 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 OR4D5Q8NGN0 318 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 SAA2-SAA4A0A096LPE2 208 aa11.9□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM189A5PLL7 270 aa11.9□□□□□ -0.51
PCDHGA11-201ENST00000398587 SAA2P0DJI9 122 aaPredicted RBP11.9□□□□□ -0.51
PCDHGA11-201ENST00000398587 RNF144BQ7Z419 303 aa11.9□□□□□ -0.51
PCDHGA11-201ENST00000398587 A0A087X0M5 115 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 A0A1B0GX30 115 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 IGHV1-46P01743 117 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 IGFBP2P18065 325 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 RAXQ9Y2V3 346 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 PCNX2A6NKB5 2137 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 MOSP00540 346 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 CFPP27918 469 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 C16orf92Q96LL3 132 aa11.89□□□□□ -0.51
PCDHGA11-201ENST00000398587 FGF16O43320 207 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 EGR1P18146 543 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 DUTP33316 252 aaKnown RBP11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 UPK2O00526 184 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 ABCA4P78363 2273 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 TFF1P04155 84 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 RNASEH2CQ8TDP1 164 aaKnown RBP11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 IL4P05112 153 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM144Q7Z5S9 345 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 ZNF383Q8NA42 475 aa11.88□□□□□ -0.51
PCDHGA11-201ENST00000398587 RAMP3O60896 148 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 PSG9Q00887 426 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 PSPNO60542 156 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 SAA1P0DJI8 122 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 Q6ZS92 163 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 Q6ZN92 141 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 CLDND2Q8NHS1 167 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 EAF1Q96JC9 268 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 CDC42EP3Q9UKI2 254 aa11.87□□□□□ -0.51
PCDHGA11-201ENST00000398587 CADP27708 2225 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 NBEAP1P0C6P0 100 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 M0R143 59 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 CCL19Q99731 98 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 MRPL18Q9H0U6 180 aaKnown RBP11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM133Q9H2Q1 129 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 H3BTX0 84 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 ATP5G2Q06055 141 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 ASCL4Q6XD76 172 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 BDP1A6H8Y1 2624 aa11.86□□□□□ -0.51
PCDHGA11-201ENST00000398587 FAM90A9PA6NNJ1 464 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 IGKV1D-33P01593 117 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 IGKV1-33P01594 117 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 HGFACQ04756 655 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 VN1R17PQ8TDU5 208 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 PKIAP61925 76 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 CBLN4Q9NTU7 201 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 CGAP01215 116 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 LY6EQ16553 131 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 TBR1Q16650 682 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 FAM106AQ4KMX7 169 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 ZNF738Q8NE65 137 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 ZNF524Q96C55 264 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 CHODLQ9H9P2 273 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 DIRC3C9JPN6 131 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 TCAPO15273 167 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms