RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PEF1Q9UBV8 284 aaKnown RBP9.31□□□□□ -0.92
HPS4-202ENST00000398145 DLEU1O43261 78 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 RAMP3O60896 148 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 TBR1Q16650 682 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 OR13A1Q8NGR1 328 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
HPS4-202ENST00000398145 C1orf147Q96MC9 270 aaPredicted RBP9.31□□□□□ -0.92
HPS4-202ENST00000398145 ZNF714Q96N38 554 aa9.31□□□□□ -0.92
HPS4-202ENST00000398145 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 GNB2P62879 340 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 HOXA4Q00056 320 aaPredicted RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 ACP7Q6ZNF0 438 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 SRSF12Q8WXF0 261 aaKnown RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 NEU1Q99519 415 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 ANAPC10Q9UM13 185 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 TFPI2P48307 235 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 ST6GALNAC3Q8NDV1 305 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 GRAMD2BQ96HH9 432 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 MRPL37Q9BZE1 423 aaKnown RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 IDI2-AS1Q9NZ38 188 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 CKS2P33552 79 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 ZNRF1Q8ND25 227 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 GUCD1Q96NT3 240 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 CDX2Q99626 313 aaPredicted RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 AGMATQ9BSE5 352 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 RNASE7Q9H1E1 156 aaKnown RBP9.3□□□□□ -0.92
HPS4-202ENST00000398145 CLDN16Q9Y5I7 305 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 PI4KAP42356 2102 aa9.3□□□□□ -0.92
HPS4-202ENST00000398145 A0A0G2JMM0 328 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 A0A1W2PPB8 328 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 A0A1W2PRS3 328 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 A8MWP6 167 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 KIR3DP1A8MWS1 328 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 IGHV3-48P01763 117 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 TIMP3P35625 211 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 GCSAMLQ5JQS6 135 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 GFRALQ6UXV0 394 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 MIR17HGQ75NE6 70 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 ASCL5Q7RTU5 278 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 NIT1Q86X76 327 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 FGFBP3Q8TAT2 258 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 PPIAL4EA0A075B759 164 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 TMEM189A5PLL7 270 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 PPIAL4DF5H284 164 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 SLC25A17O43808 307 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 PPIAL4FP0DN26 164 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 MUC15Q8N387 334 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 PMCHL2Q9BQD1 86 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
HPS4-202ENST00000398145 OSTCQ9NRP0 149 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 PPIAL4AQ9Y536 164 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 POLEQ07864 2286 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 CACNA1GO43497 2377 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 ABCA1O95477 2261 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 CELA3AP09093 270 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 KIR2DL2P43627 348 aaPredicted RBP9.29□□□□□ -0.92
HPS4-202ENST00000398145 RPL30P62888 115 aaKnown RBP9.29□□□□□ -0.92
HPS4-202ENST00000398145 PSG7Q13046 419 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 MMDQ15546 238 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 ACSF3Q4G176 576 aaPredicted RBP9.29□□□□□ -0.92
HPS4-202ENST00000398145 ALKBH7Q9BT30 221 aaPredicted RBP9.29□□□□□ -0.92
HPS4-202ENST00000398145 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 ZNF581Q9P0T4 197 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 IZUMO1RA6ND01 250 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 IGKV1-5P01602 117 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 GCSHP23434 173 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 CFHR1Q03591 330 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
HPS4-202ENST00000398145 TMEM42Q69YG0 159 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 TMEM14EPQ6UXP3 125 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 IFI27L2Q9H2X8 130 aa9.29□□□□□ -0.92
HPS4-202ENST00000398145 LOC102723996A0A087X1L8 192 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 TRGV8A0A0C4DH27 118 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 TMEM144Q7Z5S9 345 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 CHODLQ9H9P2 273 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 DOCK8Q8NF50 2099 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 IGHV3-72A0A0B4J1Y9 119 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 A6NNC1 897 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 PRR33A8MZF0 331 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 PEX7O00628 323 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 TMEM30BQ3MIR4 351 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 DCTN5Q9BTE1 182 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 GP6Q9HCN6 339 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 H3BTX0 84 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 DCAF16Q9NXF7 216 aa9.28□□□□□ -0.92
HPS4-202ENST00000398145 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.92
HPS4-202ENST00000398145 KLF7O75840 302 aaPredicted RBP9.27□□□□□ -0.92
HPS4-202ENST00000398145 TWIST1Q15672 202 aa9.27□□□□□ -0.92
HPS4-202ENST00000398145 SMIM12Q96EX1 92 aa9.27□□□□□ -0.92
HPS4-202ENST00000398145 DEPPQ9NTK1 212 aa9.27□□□□□ -0.92
HPS4-202ENST00000398145 CACNA1HO95180 2353 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms