RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 GVQW1Q8N7I0 195 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 OR5AU1Q8NGC0 362 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 OR51T1Q8NGJ9 327 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 SAMD10Q9BYL1 202 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 CEP250Q9BV73 2442 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 ASH1LQ9NR48 2969 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TRBV6-7A0A0A0MS04 114 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 NPIPB11E5RHQ5 1161 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF728P0DKX0 622 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 BLVRBP30043 206 aaPredicted RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 CXCL12P48061 93 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TAS2R46P59540 309 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 FHL3Q13643 280 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 ACOT6Q3I5F7 207 aaPredicted RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 HOGA1Q86XE5 327 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 SFTPA2Q8IWL1 248 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM59Q9BXS4 323 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 LMO7DNF2Z398 122 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 SFT2D2O95562 160 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 CLPSP04118 112 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 PFN1P07737 140 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 RBMXP38159 391 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 LHX2P50458 406 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 RPL15P61313 204 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 POU3F1Q03052 451 aaPredicted RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 GUSBP1Q15486 140 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TEX36Q5VZQ5 186 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 C16orf82Q7Z2V1 217 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 SAXO1Q8IYX7 474 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 RDH5Q92781 318 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 DDIT4LQ96D03 193 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 C2orf50Q96LR7 162 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 HSD17B10Q99714 261 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 WDR61Q9GZS3 305 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 NPVFQ9HCQ7 196 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM100Q9NV29 134 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 VDAC3Q9Y277 283 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 NCKAP5O14513 1909 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 ADAMTS20P59510 1910 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 VSIG8P0DPA2 414 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 FBXW4P57775 412 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 SRSF3P84103 164 aaKnown RBP5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 VAX1Q5SQQ9 334 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 SLC22A18ASQ8N1D0 253 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 C8orf46Q8TAG6 207 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 PBOV1Q9GZY1 135 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM9BQ9NQ34 198 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 ARID1AO14497 2285 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 LRRC30A6NM36 301 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 H0YL77 283 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 NPIPB7O75200 414 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 NDUFA7O95182 113 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 OR2H2O95918 312 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 IGKV3-11P04433 115 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 CD99P14209 185 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 LEPP41159 167 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 DCAF12Q5T6F0 453 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 PPP1R27Q86WC6 154 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 GATD1Q8NB37 220 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 SUMF2Q8NBJ7 301 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 AJUBAQ96IF1 538 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 BANF2Q9H503 90 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 IGSF10Q6WRI0 2623 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 A0A087WWC5 75 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 NSG1A0A0A6YYJ2 146 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 LOC102725191A0A1B0GVB3 256 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 DUXBA0A1W2PPF3 345 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 ATP5LO75964 103 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 HIST1H1DP16402 221 aaKnown RBP5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 THBS3P49746 956 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 CATR1Q13166 79 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM219Q86XT9 240 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 RBMXL3Q8N7X1 1067 aaKnown RBP5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF721Q8TF20 911 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 AQP10Q96PS8 301 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 IL36GQ9NZH8 169 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 DUSP13Q9UII6 198 aa5.51□□□□□ -1.53
TM9SF4-202ENST00000398022 ADAMTS9Q9P2N4 1935 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TPPP2P59282 170 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 UNC119Q13432 240 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 Q8TCH9 128 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 PRADC1Q9BSG0 188 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 LRRC61Q9BV99 259 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 FUT9Q9Y231 359 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 NUP210LQ5VU65 1888 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 IGHV2-26A0A0B4J1V2 119 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 OR2T8A6NH00 312 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM14DPA8MWL7 114 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 GEMIN2O14893 280 aaKnown RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 SRSF10O75494 262 aaKnown RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 JTBO76095 146 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TTRP02766 147 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms